RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 ADARB1P78563 741 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 LAMTOR4Q0VGL1 99 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 PPP1R26Q5T8A7 1209 aaPredicted RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 FAAH2Q6GMR7 532 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 RETREG3Q86VR2 466 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SNX31Q8N9S9 440 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC35F5Q8WV83 523 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 HDAC10Q969S8 669 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 NT5C1AQ9BXI3 368 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 SNX25Q9H3E2 840 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 PRDM12Q9H4Q4 367 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 NSMCE4AQ9NXX6 385 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 VWA7Q9Y334 891 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 TRAF6Q9Y4K3 522 aa13.59□□□□□ -0.23
RPUSD4-201ENST00000298317 CCDC78A2IDD5 438 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 MGEA5O60502 916 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 PGK1P00558 417 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 FCGR1AP12314 374 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 HNRNPLP14866 589 aaKnown RBP eCLIP13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 ENDOUP21128 410 aaKnown RBP13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 ARCN1P48444 511 aaKnown RBP13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 ATP4BP51164 291 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 BNIP2Q12982 314 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 CERCAMQ5T4B2 595 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 KCTD11Q693B1 232 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 JADE1Q6IE81 842 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 PID1Q7Z2X4 250 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 CDR2LQ86X02 465 aaPredicted RBP13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 SLC41A1Q8IVJ1 513 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 DDIASQ8IXT1 998 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 CTRCQ99895 268 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 OMDQ99983 421 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 CDT1Q9H211 546 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 POMKQ9H5K3 350 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 TNFRSF12AQ9NP84 129 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 ACTR3BQ9P1U1 418 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 FZD1Q9UP38 647 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 ACOT9Q9Y305 439 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 FIS1Q9Y3D6 152 aa13.58□□□□□ -0.23
RPUSD4-201ENST00000298317 MAGEB16A2A368 324 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 BBIP1A8MTZ0 92 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 B4GALT5O43286 388 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 GSSP48637 474 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 CBX2Q14781 532 aaPredicted RBP13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 IER5Q5VY09 327 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 FUNDC1Q8IVP5 155 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 CCNYQ8ND76 341 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 TRPV3Q8NET8 790 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 BPIFB6Q8NFQ5 453 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 PTCD2Q8WV60 388 aaKnown RBP13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 NXNL1Q96CM4 212 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 ATG4CQ96DT6 458 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 HPDLQ96IR7 371 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 LHPPQ9H008 270 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 SMARCAD1Q9H4L7 1026 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 SOX17Q9H6I2 414 aaPredicted RBP13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 AKIP1Q9NQ31 210 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 CHRAC1Q9NRG0 131 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 NRBP2Q9NSY0 501 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 SACM1LQ9NTJ5 587 aa13.58□□□□□ -0.24
RPUSD4-201ENST00000298317 YDJCA8MPS7 323 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 LACTBL1A8MY62 500 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 ACKR2O00590 384 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 SNAP29O95721 258 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 GPIP06744 558 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 AXLP30530 894 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 RFC2P35250 354 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 GJA9P57773 515 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 BFSP2Q13515 415 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 ZNF460Q14592 562 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PLCL1Q15111 1095 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 BROXQ5VW32 411 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 KRT27Q7Z3Y8 459 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 SFRP1Q8N474 314 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 TTC30BQ8N4P2 665 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 AFAP1L2Q8N4X5 818 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 HPS1Q92902 700 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 ERLEC1Q96DZ1 483 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 NRBF2Q96F24 287 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 HOPXQ9BPY8 73 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 WDR12Q9GZL7 423 aaKnown RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 C2orf40Q9H1Z8 148 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 KLHL8Q9P2G9 620 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PGAP2Q9UHJ9 254 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 ZNF639Q9UID6 485 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 FZD10Q9ULW2 581 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 THSD7AQ9UPZ6 1657 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM47E-STBD1D6RA91 191 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 H0YAE9 185 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 GPC4O75487 556 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 UGT2B4P06133 528 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 MYCLP1P12525 358 aaPredicted RBP13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 GFAPP14136 432 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 PTPN2P17706 415 aa13.57□□□□□ -0.24
RPUSD4-201ENST00000298317 TGM1P22735 817 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms