RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 DCUN1D1Q96GG9 259 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 C1orf74Q96LT6 269 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 TRIM62Q9BVG3 475 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 SLC2A11Q9BYW1 496 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 PCDH9Q9HC56 1237 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 HCFC1R1Q9NWW0 138 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 RCOR3Q9P2K3 495 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 PCDHA11Q9Y5I1 949 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 HEY1Q9Y5J3 304 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 CCDC160A6NGH7 325 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 APOL1O14791 398 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 ITM2AO43736 263 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 MFSD11O43934 449 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 SNNO75324 88 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 KLHL2O95198 593 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 ERCC2P18074 760 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 TGM2P21980 687 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 HOXC13P31276 330 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 CA8P35219 290 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 MLLT6P55198 1093 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 NUP107P57740 925 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 UBE3AQ05086 875 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 PLD1Q13393 1074 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 PAFAH1B3Q15102 231 aaKnown RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 BRMS1LQ5PSV4 323 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 STXBP5Q5T5C0 1151 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 LZTR1Q8N653 840 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 KREMEN2Q8NCW0 462 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 RIN3Q8TB24 985 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 ZSCAN18Q8TBC5 510 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 SLC26A7Q8TE54 656 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 COX4I2Q96KJ9 171 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 ZNF512Q96ME7 567 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 SERPINB11Q96P15 392 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 MRPL1Q9BYD6 325 aaKnown RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 GKN1Q9NS71 199 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 MARCH2Q9P0N8 246 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 SIRPGQ9P1W8 387 aa6.72□□□□□ -1.33
TMC1-201ENST00000297784 FAF1Q9UNN5 650 aaPredicted RBP6.72□□□□□ -1.33
TMC1-201ENST00000297784 MYO9BQ13459 2157 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 EEF2KO00418 725 aaKnown RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 CLASP2O75122 1294 aaKnown RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 RB1P06400 928 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ADH1AP07327 375 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 C8AP07357 584 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 FAM58BPP0C7Q3 252 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 SRGAP2BP0DMP2 458 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 EPCAMP16422 314 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ZNF12P17014 697 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ZNF23P17027 643 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 HALP42357 657 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 TBX4P57082 545 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 EIF3EP60228 445 aaKnown RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 CREMQ03060 361 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 GPS1Q13098 491 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 KCNC3Q14003 757 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 EFTUD2Q15029 972 aaKnown RBP eCLIP6.71□□□□□ -1.33
TMC1-201ENST00000297784 TRIP4Q15650 581 aaPredicted RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 HIF1AQ16665 826 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 RWDD4Q6NW29 188 aaKnown RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 PQLC1Q8N2U9 271 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 FAM71DQ8N9W8 422 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ADCY4Q8NFM4 1077 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 PYROXD1Q8WU10 500 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 TTC17Q96AE7 1141 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 SGF29Q96ES7 293 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ZNF419Q96HQ0 510 aaPredicted RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 FAM111AQ96PZ2 611 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 LGMNQ99538 433 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 HAUS8Q9BT25 410 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 SIK2Q9H0K1 926 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 MTIF3Q9H2K0 278 aaKnown RBP6.71□□□□□ -1.33
TMC1-201ENST00000297784 CDH22Q9UJ99 828 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 RWDD3Q9Y3V2 267 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 ZNF711Q9Y462 761 aa6.71□□□□□ -1.33
TMC1-201ENST00000297784 IGLV3-10A0A075B6K4 115 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 ARHGAP42A6NI28 874 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 ZNF701M0R085 212 aaPredicted RBP6.71□□□□□ -1.34
TMC1-201ENST00000297784 MOSPD3O75425 235 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 CRTAMO95727 393 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 OLFM2O95897 454 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 RBP3P10745 1247 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 FUT4P22083 530 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 RBL1P28749 1068 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 SLC6A4P31645 630 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 ATP5C1P36542 298 aaKnown RBP6.71□□□□□ -1.34
TMC1-201ENST00000297784 COG7P83436 770 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 PDAP1Q13442 181 aaKnown RBP6.71□□□□□ -1.34
TMC1-201ENST00000297784 TFDP2Q14188 446 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 ARL13BQ3SXY8 428 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 RABGAP1LQ5R372 815 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 TXNDC8Q6A555 127 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 TMEM53Q6P2H8 277 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 VN1R2Q8NFZ6 395 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 SLC44A1Q8WWI5 657 aa6.71□□□□□ -1.34
TMC1-201ENST00000297784 RNF34Q969K3 372 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms