RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DHRS7Q9Y394 339 aa4.87□□□□□ -1.63
CSMD3-201ENST00000297405 N4BP2Q86UW6 1770 aaPredicted RBP4.87□□□□□ -1.63
CSMD3-201ENST00000297405 ARHGAP21Q5T5U3 1957 aa4.87□□□□□ -1.63
CSMD3-201ENST00000297405 OR2AT4A6NND4 320 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PI4K2BG5E9Z4 385 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MUSKO15146 869 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PRODHO43272 600 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF682O95780 498 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 DNAJB1P25685 340 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 RFC4P35249 363 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 USP4Q13107 963 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MEA1Q16626 185 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PHC2Q8IXK0 858 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 GRAMD1CQ8IYS0 662 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 FBXO30Q8TB52 745 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF507Q8TCN5 953 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CASKIN2Q8WXE0 1202 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 AURKBQ96GD4 344 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 THUMPD1Q9NXG2 353 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF70Q9UC06 446 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ATP10AO60312 1499 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 QSOX1O00391 747 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 KAT7O95251 611 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PROCP04070 461 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 UGT2B4P06133 528 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CD72P21854 359 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ARCN1P48444 511 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 NAGLUP54802 743 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PKP1Q13835 747 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 RAB41Q5JT25 222 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MPP7Q5T2T1 576 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 FAM131AQ6UXB0 335 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 GADL1Q6ZQY3 521 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OAFQ86UD1 273 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OXCT2Q9BYC2 517 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 TAS2R3Q9NYW6 316 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ALG6Q9Y672 507 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 NUDT19A8MXV4 375 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 AP5Z1O43299 807 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PRAMEF1O95521 474 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ANXA1P04083 346 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MYL3P08590 195 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 DEFA5Q01523 94 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SULT2A1Q06520 285 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 FADDQ13158 208 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 C6orf183Q5T699 404 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 UBQLNLQ8IYU4 475 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PARP8Q8N3A8 854 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR52K2Q8NGK3 314 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR10R2Q8NGX6 335 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 DIRAS2Q96HU8 199 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PAFAH2Q99487 392 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZCCHC2Q9C0B9 1178 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 C3orf14Q9HBI5 128 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 C1orf109Q9NX04 203 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SHOXO15266 292 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 RIPK2O43353 540 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MITFO75030 526 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 BMP7P18075 431 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 LBPP18428 481 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 RPL14P50914 215 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 TTLL12Q14166 644 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 TCEA2Q15560 299 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 DGKDQ16760 1214 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 KANK2Q63ZY3 851 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ADNP2Q6IQ32 1131 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MSANTD2Q6P1R3 559 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OTOAQ7RTW8 1153 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CAMKK1Q8N5S9 505 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZNF248Q8NDW4 579 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 BHLHE22Q8NFJ8 381 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR2T34Q8NGX1 318 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR2T3Q8NH03 318 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PNKPQ96T60 521 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CD274Q9NZQ7 290 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 RNF112Q9ULX5 631 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 NEXMIFQ5QGS0 1516 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MRC2Q9UBG0 1479 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SUPT3HB4E1H0 165 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PROM1O43490 865 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SNAPINO95295 136 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 UCHL1P09936 223 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 HIBADHP31937 336 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OMPP47874 163 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 INTS6LQ5JSJ4 861 aaKnown RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PAGE2Q7Z2X7 111 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 C4orf33Q8N1A6 199 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR56A4Q8NGH8 313 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 PI4K2BQ8TCG2 481 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ACSBG1Q96GR2 724 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 SNX27Q96L92 541 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ANO3Q9BYT9 981 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 MTFR1LQ9H019 292 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 OR51E2Q9H255 320 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 GULP1Q9UBP9 304 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 CPS1P31327 1500 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 GAKO14976 1311 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 ZSCAN5CA6NGD5 496 aaPredicted RBP4.86□□□□□ -1.63
CSMD3-201ENST00000297405 EFCAB9A8MZ26 197 aa4.86□□□□□ -1.63
CSMD3-201ENST00000297405 FOXN3O00409 490 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms