RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 OR4K2Q8NGD2 314 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CINPQ9BW66 212 aaPredicted RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 POLR1EQ9GZS1 481 aaKnown RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 RHOCP08134 193 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 TFEBP19484 476 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 ELF1P32519 619 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CDK7P50613 346 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CDK18Q07002 472 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
RUBCN-202ENST00000296343 POTEHQ6S545 545 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 TMEM207Q6UWW9 146 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 FRMD7Q6ZUT3 714 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 CYS1Q717R9 158 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 LRRC43Q8N309 656 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 PYDC1Q8WXC3 89 aa13.28□□□□□ -0.28
RUBCN-202ENST00000296343 MYOFQ9NZM1 2061 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 HEATR9A2RTY3 570 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 CCDC162PA2VCL2 907 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.28
RUBCN-202ENST00000296343 OR1I1O60431 355 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 ACSL4O60488 711 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 ATP5HO75947 161 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 SUPT7LO94864 414 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 HOXC13P31276 330 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 PPP1R3AQ16821 1122 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 CCDC153Q494R4 210 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 LAYNQ6UX15 382 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 ARHGAP18Q8N392 663 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 WFDC5Q8TCV5 224 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 STMN2Q93045 179 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 IGSF21Q96ID5 467 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 C1orf74Q96LT6 269 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 LENG8Q96PV6 779 aaPredicted RBP13.27□□□□□ -0.28
RUBCN-202ENST00000296343 ILKAPQ9H0C8 392 aaPredicted RBP13.27□□□□□ -0.28
RUBCN-202ENST00000296343 TREX1Q9NSU2 369 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 OXSMQ9NWU1 459 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 VPS28Q9UK41 221 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 AGO1Q9UL18 857 aaKnown RBP13.27□□□□□ -0.28
RUBCN-202ENST00000296343 PHF24Q9UPV7 400 aa13.27□□□□□ -0.28
RUBCN-202ENST00000296343 NLRC5Q86WI3 1866 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 GREB1Q4ZG55 1949 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 STX16-NPEPL1H3BU86 382 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 STC2O76061 302 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 CKMP06732 381 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 SKIV2L2P42285 1042 aaKnown RBP13.27□□□□□ -0.29
RUBCN-202ENST00000296343 SLC11A2P49281 568 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 OXCT1P55809 520 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 NKX3-2P78367 333 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 NSUN2Q08J23 767 aaKnown RBP eCLIP13.27□□□□□ -0.29
RUBCN-202ENST00000296343 TRIM67Q6ZTA4 783 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 HPS6Q86YV9 775 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 DEFB107AQ8IZN7 70 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 TMEM151AQ8N4L1 468 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 SLC43A3Q8NBI5 491 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 FAM156AQ8NDB6 213 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 CCDC97Q96F63 343 aaPredicted RBP13.27□□□□□ -0.29
RUBCN-202ENST00000296343 CCDC106Q9BWC9 280 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 TRPM5Q9NZQ8 1165 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 TAGLN3Q9UI15 199 aa13.27□□□□□ -0.29
RUBCN-202ENST00000296343 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 CAPN14A8MX76 684 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 TMEM189-UBE2V1I3L0A0 370 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 TBL1XO60907 577 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 PRAMEF12O95522 483 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 MPOP05164 745 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 SERPINF2P08697 491 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 ALPIP09923 528 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 WEE1P30291 646 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 PTDSS1P48651 473 aaKnown RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 ZNF177Q13360 481 aaPredicted RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 HECTD2Q5U5R9 776 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 DNAJB7Q7Z6W7 309 aaPredicted RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 ZNF398Q8TD17 642 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 INPP5DQ92835 1189 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 HBEGFQ99075 208 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 TSEN34Q9BSV6 310 aaKnown RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 CLIC5Q9NZA1 410 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 CLEC4EQ9ULY5 219 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 PCDHB9Q9Y5E1 797 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 LDB2O43679 373 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 SERPINA6P08185 405 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 ATXN1LP0C7T5 689 aaKnown RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 GRK2P25098 689 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 MAP2K2P36507 400 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 PKNOX1P55347 436 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 TUBB3Q13509 450 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 IKBKEQ14164 716 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 LSM12Q3MHD2 195 aaKnown RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 MSANTD2Q6P1R3 559 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 SCIMPQ6UWF3 145 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 SPRED2Q7Z698 418 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 CILP2Q8IUL8 1156 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 N4BP2L2Q92802 583 aaPredicted RBP13.26□□□□□ -0.29
RUBCN-202ENST00000296343 CDH19Q9H159 772 aa13.26□□□□□ -0.29
RUBCN-202ENST00000296343 TNKS2Q9H2K2 1166 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms