RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HLA-DPA1P20036 260 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PTP4A2Q12974 167 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PWP1Q13610 501 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SPIDRQ14159 915 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
HPS3-201ENST00000296051 PFKFB4Q16877 469 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 FRMD7Q6ZUT3 714 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 XYLT1Q86Y38 959 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 FBXO22Q8NEZ5 403 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 BPIFB6Q8NFQ5 453 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SLCO2A1Q92959 643 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 MCRS1Q96EZ8 462 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 CHRAC1Q9NRG0 131 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 GIMAP4Q9NUV9 329 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 BCL9LQ86UU0 1499 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 WDR47O94967 919 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 XRCC1P18887 633 aaPredicted RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 GRK3P35626 688 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 GMPRP36959 345 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 GPR158Q5T848 1215 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 UGT3A1Q6NUS8 523 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 ASRGL1Q7L266 308 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 UNC93AQ86WB7 457 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PSTKQ8IV42 348 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 OR52K2Q8NGK3 314 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 MOCOSQ96EN8 888 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 HSPBAP1Q96EW2 488 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 C11orf49Q9H6J7 331 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 RIC8BQ9NVN3 520 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 OR12D3Q9UGF7 316 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 ZNF214Q9UL59 606 aaPredicted RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 CHD2O14647 1828 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 SMIM28A0A1B0GU29 152 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 CCL16O15467 120 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 TYROBPO43914 113 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SOAT2O75908 522 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 MSH3P20585 1137 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 ATP6V1E1P36543 226 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 CREMQ03060 361 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 NEPROQ6NW34 567 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 FNDC5Q8NAU1 212 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 FBXO27Q8NI29 283 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 CCDC126Q96EE4 140 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 TXLNGYQ9BZA5 131 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 CLK4Q9HAZ1 481 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 XPNPEP1Q9NQW7 623 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 COQ4Q9Y3A0 265 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PTCH2Q9Y6C5 1203 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 RPL17P18621 184 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 PBX3P40426 434 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 LSM12Q3MHD2 195 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 PLEKHG4Q58EX7 1191 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 RHBDF2Q6PJF5 856 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 TMC5Q6UXY8 1006 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 MILR1Q7Z6M3 343 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SYTL1Q8IYJ3 562 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 ING5Q8WYH8 240 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 BORCS6Q96GS4 357 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 PPP1R10Q96QC0 940 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 BDH2Q9BUT1 245 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 SPAG4Q9NPE6 437 aa13.51□□□□□ -0.25
HPS3-201ENST00000296051 TRNAU1APQ9NX07 287 aaKnown RBP13.51□□□□□ -0.25
HPS3-201ENST00000296051 DLDP09622 509 aaKnown RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 ERCC2P18074 760 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 SOAT1P35610 550 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 SLC5A3P53794 718 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 CA9Q16790 459 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 C11orf74Q86VG3 221 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 HORMAD1Q86X24 394 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 FAM126BQ8IXS8 530 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 ACMSDQ8TDX5 336 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 TMEM159Q96B96 161 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 AGAP2Q99490 1192 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 RTKNQ9BST9 563 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 C9orf16Q9BUW7 83 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 DGKBQ9Y6T7 804 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 VNN1O95497 513 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 PIRTP0C851 137 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 RAD23AP54725 363 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 EIF2B5Q13144 721 aaKnown RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 FRG1Q14331 258 aaKnown RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 ZNF460Q14592 562 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 RGS21Q2M5E4 152 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 SLC9B1Q4ZJI4 515 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 TRAF7Q6Q0C0 670 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 TRAPPC5Q8IUR0 188 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 WNT8BQ93098 351 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 PNPLA3Q9NST1 481 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 AKAP7Q9P0M2 348 aaPredicted RBP13.5□□□□□ -0.25
HPS3-201ENST00000296051 SNED1Q8TER0 1413 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 GLP2RO95838 553 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 T-ENOLP0DO92 83 aa13.5□□□□□ -0.25
HPS3-201ENST00000296051 TSHRP16473 764 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms