RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PLK1P53350 603 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 SLC12A2P55011 1212 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 ARF5P84085 180 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 INO80DQ53TQ3 878 aaPredicted RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 SIRPB2Q5JXA9 342 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 PLD6Q8N2A8 252 aaKnown RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 MAB21L3Q8N8X9 362 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 C2CD4AQ8NCU7 369 aaPredicted RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 NSMCE3Q96MG7 304 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 CINPQ9BW66 212 aaPredicted RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 ARHGEF3Q9NR81 526 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 ZNF358Q9NW07 568 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 SMPD4Q9NXE4 827 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 UBA2Q9UBT2 640 aaPredicted RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 ZMYM5Q9UJ78 669 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 LSM7Q9UK45 103 aaKnown RBP9.21□□□□□ -0.94
PDPN-201ENST00000294489 RIMKLBQ9ULI2 386 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 C2orf16Q68DN1 1984 aa9.21□□□□□ -0.94
PDPN-201ENST00000294489 FAM95CA0A1B0GW59 222 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 A0A1W2PRU2 124 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 LEFTY2O00292 366 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TBL1XO60907 577 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 PRKCGP05129 697 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 FGF1P05230 155 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ATP5BP06576 529 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 MYOGP15173 224 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 GABRB3P28472 473 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CRABP2P29373 138 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 RAB10P61026 200 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 MPP1Q00013 466 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ACVR1Q04771 509 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 NSUN2Q08J23 767 aaKnown RBP eCLIP9.2□□□□□ -0.94
PDPN-201ENST00000294489 FSCBQ5H9T9 825 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 RALGPS1Q5JS13 557 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 RNF219Q5W0B1 726 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 ASRGL1Q7L266 308 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TNS4Q8IZW8 715 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 PIWIL2Q8TC59 973 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 PEX13Q92968 403 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 RAB3IPQ96QF0 476 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 GCNAQ96QF7 691 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 LBHD1Q9BQE6 289 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 CORO1BQ9BR76 489 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 FEM1AQ9BSK4 669 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 FAM96AQ9H5X1 160 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TASP1Q9H6P5 420 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ZNF395Q9H8N7 513 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 HCFC1R1Q9NWW0 138 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 MARCOQ9UEW3 520 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 ACOT9Q9Y305 439 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TTC24A2A3L6 582 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 TSPAN3O60637 253 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 GLDCP23378 1020 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 HNRNPH1P31943 449 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 AQP5P55064 265 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 KCNJ2P63252 427 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 PRAMEP78395 509 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ELF3P78545 371 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 IRF9Q00978 393 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ITGA9Q13797 1035 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 C9orf50Q5SZB4 431 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CES4AQ5XG92 561 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 GALNT7Q86SF2 657 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 LMNTD2Q8IXW0 634 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CMTM8Q8IZV2 173 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 KIF2BQ8N4N8 673 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ACVR1CQ8NER5 493 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 RDH11Q8TC12 318 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 INPP5DQ92835 1189 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 SKA1Q96BD8 255 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 ZNF707Q96C28 371 aaPredicted RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 ELMO2Q96JJ3 720 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 NUDCD1Q96RS6 583 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 C20orf27Q9GZN8 174 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CFAP97Q9P2B7 532 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 HAO1Q9UJM8 370 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 DOCK6Q96HP0 2047 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 SCN8AQ9UQD0 1980 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TYW5A2RUC4 315 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 PHGDHO43175 533 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 SLC7A4O43246 635 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 EPCAMP16422 314 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CA8P35219 290 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 POU4F1Q01851 419 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 KCNC3Q14003 757 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 MPPE1Q53F39 396 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 SLC41A1Q8IVJ1 513 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 BBS7Q8IWZ6 715 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 GPATCH11Q8N954 259 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 DCAF4L2Q8NA75 395 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 OR6P1Q8NGX9 317 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 FIBINQ8TAL6 211 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 TMA16Q96EY4 203 aaKnown RBP9.2□□□□□ -0.94
PDPN-201ENST00000294489 LRMDAQ9H2I8 198 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 LHX3Q9UBR4 397 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 DNAJC16Q9Y2G8 782 aa9.2□□□□□ -0.94
PDPN-201ENST00000294489 CCDC22O60826 627 aa9.19□□□□□ -0.94
PDPN-201ENST00000294489 TRIM13O60858 407 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms