RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 LZTR1Q8N653 840 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PCDH20Q8N6Y1 951 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 POP5Q969H6 163 aaKnown RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BORCS5Q969J3 196 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PLEKHG4BQ96PX9 1271 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 TLE6Q9H808 572 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PIDD1Q9HB75 910 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZSCAN32Q9NX65 697 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 MBD2Q9UBB5 411 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 C3orf18Q9UK00 162 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 STX11O75558 287 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 MYL12AP19105 171 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 CDH3P22223 829 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 POLD3Q15054 466 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 MZT2BQ6NZ67 158 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 PTAR1Q7Z6K3 402 aaPredicted RBP11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF276Q8N554 614 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 METTL6Q8TCB7 284 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 CAPSLQ8WWF8 208 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 BAP1Q92560 729 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 TEKT5Q96M29 485 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 ADGRE3Q9BY15 652 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 KLHL28Q9NXS3 571 aa11.92□□□□□ -0.5
SYNGAP1-201ENST00000293748 A0A087X1B8 175 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 A0A0U1RQJ8 604 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 RCCD1A6NED2 376 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 IL6P05231 212 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ADH1AP07327 375 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ALOX5P09917 674 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CCNA2P20248 432 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MIPP30301 263 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 RENBPP51606 427 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MARC1Q5VT66 337 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TDRD10Q5VZ19 366 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF280DQ6N043 979 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 LRRC55Q6ZSA7 311 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TMEM132CQ8N3T6 1108 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 KBTBD8Q8NFY9 601 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MAGEE2Q8TD90 523 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SH3BP1Q9Y3L3 701 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 LINC01553A4QN01 128 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MYL12BO14950 172 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 HDAC3O15379 428 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SHOX2O60902 331 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 VAPBO95292 243 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CYP1A2P05177 515 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 PABPC1P11940 636 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CYP3A5P20815 502 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ACAT1P24752 427 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CCT3P49368 545 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MAPK10P53779 464 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 OXCT1P55809 520 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 MIIPQ5JXC2 388 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 DDX53Q86TM3 631 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZBTB45Q96K62 511 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CLK4Q9HAZ1 481 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 AP4B1Q9Y6B7 739 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 A0A0B4J269 797 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 H7C0S8 307 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SNRPB2P08579 225 aaKnown RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SERPINF2P08697 491 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 UQCRBP14927 111 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 KLRC2P26717 231 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 GLUD2P49448 558 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 NAGLUP54802 743 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ERVK-21P61565 698 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 FOLH1Q04609 750 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SQLEQ14534 574 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 C16orf46Q6P387 395 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 C16orf59Q7L2K0 433 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CHMP1BQ7LBR1 199 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TRABD2AQ86V40 505 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 GIPC3Q8TF64 312 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 REEP1Q9H902 201 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 NT5MQ9NPB1 228 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SPAG4Q9NPE6 437 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ITGA11Q9UKX5 1188 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 LIASO43766 372 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 FGF18O76093 207 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 LCA5LO95447 670 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 KDELR1P24390 212 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 HALP42357 657 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 BNIP2Q12982 314 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM109BQ6ICB4 259 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 CDC73Q6P1J9 531 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ZNF554Q86TJ5 538 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TTC30AQ86WT1 665 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 EPHX4Q8IUS5 362 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 ADGRF2Q8IZF7 708 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 FAM13CQ8NE31 585 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 OXCT2Q9BYC2 517 aaPredicted RBP11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 PRDM12Q9H4Q4 367 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 SLCO1B3Q9NPD5 702 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TLR9Q9NR96 1032 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
SYNGAP1-201ENST00000293748 FSCN2O14926 492 aa11.9□□□□□ -0.5
SYNGAP1-201ENST00000293748 CXCL14O95715 111 aa11.9□□□□□ -0.5
SYNGAP1-201ENST00000293748 EPB42P16452 691 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms