RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 SPNS2Q8IVW8 549 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 FAM126BQ8IXS8 530 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 OXCT2Q9BYC2 517 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 XYLT2Q9H1B5 865 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ELOVL6Q9H5J4 265 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 EXOSC4Q9NPD3 245 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 PCDH12Q9NPG4 1184 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 MRPL40Q9NQ50 206 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 GIMAP2Q9UG22 337 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 DNMT3LQ9UJW3 386 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 NHSL1Q5SYE7 1610 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 NCK1P16333 377 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 PIK3R1P27986 724 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CORO1AP31146 461 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 GKP32189 559 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 GGT5P36269 586 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SPDYCQ5MJ68 293 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 LIPMQ5VYY2 423 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 LRRC8BQ6P9F7 803 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 OLFML1Q6UWY5 402 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 GCNT7Q6ZNI0 430 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 PIGWQ7Z7B1 504 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SYTL1Q8IYJ3 562 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ZNF614Q8N883 585 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 C12orf50Q8NA57 414 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 OR13C4Q8NGS5 318 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 BBS2Q9BXC9 721 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CADM1Q9BY67 442 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 GLOD4Q9HC38 313 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CNGB3Q9NQW8 809 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 KIAA1551Q9HCM1 1747 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 FER1L6Q2WGJ9 1857 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 NEDD8-MDP1E9PL57 170 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 UBXN8O00124 270 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SERPINI2O75830 405 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 STBD1O95210 358 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CNPP09543 421 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 HLA-DPA1P20036 260 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 NR4A1P22736 598 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ME2P23368 584 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 AQP1P29972 269 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 GABRB2P47870 512 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SLC16A1P53985 500 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 VPS26BQ4G0F5 336 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 VARS2Q5ST30 1063 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 DHFR2Q86XF0 187 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 PLD6Q8N2A8 252 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 BANPQ8N9N5 519 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 OLFM3Q96PB7 478 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 LENG8Q96PV6 779 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 CDH19Q9H159 772 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 CCSER2Q9H7U1 834 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 PARVBQ9HBI1 364 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ZNF229Q9UJW7 825 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 BCLAF3A2AJT9 711 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 C5orf58C9J3I9 102 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 SIX3O95343 332 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 C1RP00736 705 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ITGALP20701 1170 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 DAOAP59103 153 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 RPL38P63173 70 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 ALDH6A1Q02252 535 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 PPP1R8Q12972 351 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 WASHC2DQ5SRD0 308 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 TRAPPC5Q8IUR0 188 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 UCMAQ8WVF2 138 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 ALG2Q9H553 416 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 EVLQ9UI08 416 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 SATB2Q9UPW6 733 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 EIF3LQ9Y262 564 aaKnown RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 ACTL7AQ9Y615 435 aa4.81□□□□□ -1.64
UBR1-201ENST00000290650 COL16A1Q07092 1604 aaPredicted RBP4.81□□□□□ -1.64
UBR1-201ENST00000290650 TMEM247A6NEH6 219 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HS6ST1O60243 411 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TMCC1O94876 653 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HLA-DQB2P05538 268 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ACADSP16219 412 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GABRR2P28476 465 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 CRHR1P34998 444 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ATP6V1E1P36543 226 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SLC1A2P43004 574 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PRIM2P49643 509 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 IDH3AP50213 366 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 POU5F1Q01860 360 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 DGCR6Q14129 220 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HECTD3Q5T447 861 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 STRADAQ7RTN6 431 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 ANKRD46Q86W74 232 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HERC6Q8IVU3 1022 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 TOP6BLQ8N6T0 577 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 MCRS1Q96EZ8 462 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PPM1MQ96MI6 270 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PHF12Q96QT6 1004 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 PCDHAC1Q9H158 963 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 GBA3Q9H227 469 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 NOL11Q9H8H0 719 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 ZNF197O14709 1029 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 SORBS2O94875 1100 aaKnown RBP4.8□□□□□ -1.64
UBR1-201ENST00000290650 GSNP06396 782 aa4.8□□□□□ -1.64
UBR1-201ENST00000290650 HSPA1AP0DMV8 641 aaKnown RBP4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms