RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 AQP4P55087 323 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PSME3P61289 254 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 DLG4P78352 724 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 DDR2Q16832 855 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CBWD6Q4V339 395 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CBWD3Q5JTY5 395 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 CBWD5Q5RIA9 395 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 LINC00523Q86TU6 105 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PHOSPHO2Q8TCD6 241 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 TMEM109Q9BVC6 243 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 PRELID1Q9Y255 219 aa11.45□□□□□ -0.58
NPC1L1-201ENST00000289547 M0R2N6 131 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 ZW10O43264 779 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 OR1E1P30953 314 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TP53BP2Q13625 1128 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TRIQKQ629K1 86 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 GALNT18Q6P9A2 607 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 BPIFB6Q8NFQ5 453 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 VPS33AQ96AX1 596 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 RCN3Q96D15 328 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 MARK4Q96L34 752 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PRDM16Q9HAZ2 1276 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PIH1D1Q9NWS0 290 aaKnown RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 COMMD8Q9NX08 183 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 LRP5O75197 1615 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PIPSLA2A3N6 862 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 FGF18O76093 207 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 ZNF682O95780 498 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 IGSF6O95976 241 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 GSSP48637 474 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 SMAD3P84022 425 aaKnown RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 CSHL1Q14406 222 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 NPY5RQ15761 445 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TMEM110Q86TL2 294 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 SH3KBP1Q96B97 665 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 C2orf49Q9BVC5 232 aaPredicted RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 ACSS3Q9H6R3 686 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 ACP6Q9NPH0 428 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 EHD3Q9NZN3 535 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 USP18Q9UMW8 372 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TGFB1I1O43294 461 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 NDUFS3O75489 264 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PIGRP01833 764 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 APODP05090 189 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 ZNF12P17014 697 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 CCT8P50990 548 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PRMT9Q6P2P2 845 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TPGS1Q6ZTW0 290 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 PIGZQ86VD9 579 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TBC1D19Q8N5T2 526 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 BTBD9Q96Q07 612 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 MAST2Q6P0Q8 1798 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TRIM38O00635 465 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 CCNKO75909 580 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 POU1F1P28069 291 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 AKR1D1P51857 326 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 CSE1LP55060 971 aaKnown RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 POU4F1Q01851 419 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 SGCGQ13326 291 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 SLC35G1Q2M3R5 365 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 CDCA2Q69YH5 1023 aaPredicted RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 TCAIMQ8N3R3 496 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 AMER2Q8N7J2 671 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 KAT5Q92993 513 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 WDR12Q9GZL7 423 aaKnown RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 SAE1Q9UBE0 346 aaPredicted RBP11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 LRRC42Q9Y546 428 aa11.44□□□□□ -0.58
NPC1L1-201ENST00000289547 BAZ2AQ9UIF9 1905 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 NCANO14594 1321 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PRR23AA6NEV1 266 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TLR5O60602 858 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 DBTP11182 482 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 EN2P19622 333 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TUBP50607 506 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FCHO2Q0JRZ9 810 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 HGSNATQ68CP4 663 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 SCUBE3Q8IX30 993 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 SETD9Q8NE22 299 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FIG4Q92562 907 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 WNT8BQ93098 351 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PHF21BQ96EK2 531 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FUBP3Q96I24 572 aaKnown RBP eCLIP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 ZFP14Q9HCL3 533 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 H3BNX3 289 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FSCN2O14926 492 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 FAM163BP0C2L3 166 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 MTHFRP42898 656 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 LILRA4P59901 499 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 CACNA1SQ13698 1873 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PDCD4Q53EL6 469 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PAGE2BQ5JRK9 111 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TTC23Q5W5X9 447 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 TMEM192Q8IY95 271 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 KLHL32Q96NJ5 620 aa11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 MRPL45Q9BRJ2 306 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 C12orf65Q9H3J6 166 aaKnown RBP11.43□□□□□ -0.58
NPC1L1-201ENST00000289547 PTPRHQ9HD43 1115 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms