RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SERPINA1P01009 418 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 C6orf52Q5T4I8 152 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 STXBP5Q5T5C0 1151 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 NEPROQ6NW34 567 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 C11orf88Q6PI97 169 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ADGRG6Q86SQ4 1221 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 CACTIN-AS1Q8N1I8 211 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF420Q8TAQ5 688 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 UROC1Q96N76 676 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ELOVL4Q9GZR5 314 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF624Q9P2J8 865 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SNAPC5O75971 98 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 DHFRP00374 187 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 DBTP11182 482 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 AMPD1P23109 780 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 HPCAL1P37235 193 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 CLK2P49760 499 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 BCAP31P51572 246 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ATP6V0D1P61421 351 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 NOMO1Q15155 1222 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 ZNF829Q3KNS6 432 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 CELF3Q5SZQ8 465 aaKnown RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 MFSD4BQ5TF39 518 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 PMF1Q6P1K2 205 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 PAGE2Q7Z2X7 111 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 UNC93AQ86WB7 457 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 SMARCD1Q96GM5 515 aa17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 RCOR3Q9P2K3 495 aaPredicted RBP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.61■□□□□ 0.41
PCDHA13-201ENST00000289272 FGF10O15520 208 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 RNASEH1O60930 286 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 CPSF4O95639 269 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 ASS1P00966 412 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 HGH1Q9BTY7 390 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 NOL11Q9H8H0 719 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 AKAP7Q9P0M2 348 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 UXTQ9UBK9 157 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 TELO2Q9Y4R8 837 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PARP4Q9UKK3 1724 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 LOC100506127A0A0U1RQW1 187 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PRMT5O14744 637 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 RGS20O76081 388 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 ERVK-10P10266 1014 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 ADIGQ0VDE8 80 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 UGCGQ16739 394 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 RBM48Q5RL73 367 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SPESP1Q6UW49 350 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 UBR7Q8N806 425 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC7A5P2Q9GIP4 190 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PRDM8Q9NQV8 689 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 UBE2QL1A1L167 161 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 RGS10O43665 173 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 TMCC2O75069 709 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 AMHP03971 560 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC7A2P52569 658 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 ADAM17P78536 824 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 MOGQ16653 247 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 B3GALT6Q96L58 329 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 AASDHPPTQ9NRN7 309 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PNPOQ9NVS9 261 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 RBM22Q9NW64 420 aaKnown RBP eCLIP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 MAFO75444 373 aaPredicted RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 ATP13A4Q4VNC1 1196 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 MARC1Q5VT66 337 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 DNAJB3Q8WWF6 145 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SLITRK2Q9H156 845 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 MRPL39Q9NYK5 338 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SALL4Q9UJQ4 1053 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 SAMD4AQ9UPU9 718 aaKnown RBP17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 TNFSF13BQ9Y275 285 aa17.6■□□□□ 0.41
PCDHA13-201ENST00000289272 BCLAF3A2AJT9 711 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 TBX10O75333 385 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 LRIG2O94898 1065 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 LGALS2P05162 132 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 THRBP10828 461 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 TIE1P35590 1138 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 RPL3P39023 403 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 ZDHHC24Q6UX98 284 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 PTCD2Q8WV60 388 aaKnown RBP17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 LHX5Q9H2C1 402 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 HIPK3Q9H422 1215 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 CCR1P32246 355 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 UNC5AQ6ZN44 842 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 KREMEN1Q96MU8 473 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 PCDHB18PQ96TA0 734 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 ACOX2Q99424 681 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 IKZF4Q9H2S9 585 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 SNX7Q9UNH6 387 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 GSAPA4D1B5 854 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 PAPSS1O43252 624 aaPredicted RBP17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 GUCY1B2O75343 617 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 ZMPSTE24O75844 475 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 SLC5A3P53794 718 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 ELP6Q0PNE2 266 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 POU6F1Q14863 301 aa17.59■□□□□ 0.41
PCDHA13-201ENST00000289272 KHDRBS2Q5VWX1 349 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms