RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 CDKL3Q8IVW4 592 aaPredicted RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 IQCF2Q8IXL9 164 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 ANKRD13AQ8IZ07 590 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 MTMR14Q8NCE2 650 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 CALML6Q8TD86 181 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 UPF1Q92900 1129 aaKnown RBP eCLIP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 HDAC11Q96DB2 347 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 CENPNQ96H22 339 aaPredicted RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 TXNDC15Q96J42 360 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 CNPY3Q9BT09 278 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 C9orf16Q9BUW7 83 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 EMILIN2Q9BXX0 1053 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 XYLT2Q9H1B5 865 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 MIR1-1HGQ9H1L0 117 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 LHX5Q9H2C1 402 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 FBRSL1Q9HCM7 1045 aaKnown RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 PKD2L2Q9NZM6 624 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 DKK3Q9UBP4 350 aa9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 WARS2Q9UGM6 360 aaKnown RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 MAGED1Q9Y5V3 778 aaPredicted RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 ZNF638Q14966 1978 aaKnown RBP9.24□□□□□ -0.93
HMGCLL1-201ENST00000274901 ILVBLA1L0T0 632 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 NEMP2A6NFY4 417 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TARM1B6A8C7 271 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 GPC4O75487 556 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SRP72O76094 671 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MICAL2O94851 1124 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 FASP25445 335 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 YWHAQP27348 245 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CAP2P40123 477 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 GARSP41250 739 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 GP2P55259 537 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 COPZ1P61923 177 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 LSM3P62310 102 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SP4Q02446 784 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 OCA2Q04671 838 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CAPRIN1Q14444 709 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 IRAK1BP1Q5VVH5 260 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 BROXQ5VW32 411 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 FAM183BPQ6ZVS7 135 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TAS2R42Q7RTR8 314 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 FAM83AQ86UY5 434 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 FUNDC1Q8IVP5 155 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 KIAA2013Q8IYS2 634 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SLC22A15Q8IZD6 547 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SLC38A6Q8IZM9 456 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SCML4Q8N228 414 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MINDY2Q8NBR6 621 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SMG8Q8ND04 991 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MYRFLQ96LU7 910 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CEP295NLQ96MC4 621 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 QKIQ96PU8 341 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CENPOQ9BU64 300 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 UPF3AQ9H1J1 476 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 C2orf40Q9H1Z8 148 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 NGRNQ9NPE2 291 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TBC1D13Q9NVG8 400 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 VTI1BQ9UEU0 232 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 PGAP2Q9UHJ9 254 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ZNF229Q9UJW7 825 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CARD8Q9Y2G2 431 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 PCM1Q15154 2024 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TNPO2O14787 897 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MGEA5O60502 916 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ABCB7O75027 752 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 UGT2B11O75310 529 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 H2AFYO75367 372 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MYCLP12524 364 aaPredicted RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 PRKCAP17252 672 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CRHBPP24387 322 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 PSMB4P28070 264 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CSRP3P50461 194 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 STX5Q13190 355 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 NAB1Q13506 487 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 GRM3Q14832 879 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ADPRMQ3LIE5 342 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 DPH6Q7L8W6 267 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TFAP2DQ7Z6R9 452 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ZBTB33Q86T24 672 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CENPLQ8N0S6 344 aaPredicted RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SFRP1Q8N474 314 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 FSTL5Q8N475 847 aaPredicted RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ANKRD52Q8NB46 1076 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 COLGALT1Q8NBJ5 622 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 DNERQ8NFT8 737 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 CLEC4DQ8WXI8 215 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 ZNF669Q96BR6 464 aaPredicted RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 TAAR1Q96RJ0 339 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MCMBPQ9BTE3 642 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MRPL46Q9H2W6 279 aaKnown RBP9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 SNX25Q9H3E2 840 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 NEK6Q9HC98 313 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MAP10Q9P2G4 905 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 MORF4L1Q9UBU8 362 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 HACL1Q9UJ83 578 aa9.23□□□□□ -0.93
HMGCLL1-201ENST00000274901 V9GYQ6 96 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms