RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MAMDC4Q6UXC1 1216 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 CPNE8Q86YQ8 564 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 RNF148Q8N7C7 305 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 USP1O94782 785 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 MT-CYBP00156 380 aaPredicted RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 HTRA3P83110 453 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 FUKQ8N0W3 1084 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 PIWIL2Q8TC59 973 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 OSCP1Q8WVF1 389 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 CKAP2Q8WWK9 683 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 BLOC1S6Q9UL45 172 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 ASF1AQ9Y294 204 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 ACTL7BQ9Y614 415 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 A0A1W2PPM1 405 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 IRAK2O43187 625 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 IFNA14P01570 189 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 EIF2S1P05198 315 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 COL6A1P12109 1028 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 EDNRBP24530 442 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 DIS3LQ8TF46 1054 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 TMEM175Q9BSA9 504 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 SLC25A51Q9H1U9 297 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 ZFP14Q9HCL3 533 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 GLYATL1P3A0A0U1RQE8 302 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 HNRNPRO43390 633 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 PEX11AO75192 247 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 RPP40O75818 363 aaKnown RBP13.78□□□□□ -0.2
NPC1-201ENST00000269228 GJA1P17302 382 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 ATP6V1B2P21281 511 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 PPP2R1BP30154 601 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 S100A3P33764 101 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 GATMP50440 423 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 CAP1Q01518 475 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 WLSQ5T9L3 541 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 OSTM1Q86WC4 334 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 WDR48Q8TAF3 677 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 SIKE1Q9BRV8 207 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 TMCC3Q9ULS5 477 aa13.78□□□□□ -0.2
NPC1-201ENST00000269228 KANSL1LA0AUZ9 987 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 CCL22O00626 93 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 AP2A1O95782 977 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 HNF4AP41235 474 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 NDST2P52849 883 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 BST1Q10588 318 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 CDYL2Q8N8U2 506 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 FIG4Q92562 907 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 RHOJQ9H4E5 214 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 NOD2Q9HC29 1040 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.77□□□□□ -0.2
NPC1-201ENST00000269228 SOHLH2Q9NX45 425 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 STARD13Q9Y3M8 1113 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 DNM1LO00429 736 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 LBPP18428 481 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 CENPAP49450 140 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 DGKGP49619 791 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 RPS24P62847 133 aaKnown RBP13.77□□□□□ -0.2
NPC1-201ENST00000269228 CYP20A1Q6UW02 462 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 SCIMPQ6UWF3 145 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 SH3RF2Q8TEC5 729 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 ASB3Q9Y575 518 aa13.77□□□□□ -0.2
NPC1-201ENST00000269228 FAM237BA0A1B0GVD1 139 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SLC16A1P53985 500 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 CORO7P57737 925 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 ATP6V0D1P61421 351 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 EXOC3L1Q86VI1 746 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 TBATAQ96M53 351 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 CCSER2Q9H7U1 834 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 IMPAD1Q9NX62 359 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 CDV3Q9UKY7 258 aaKnown RBP13.77□□□□□ -0.21
NPC1-201ENST00000269228 NDRG2Q9UN36 371 aaKnown RBP13.77□□□□□ -0.21
NPC1-201ENST00000269228 SNX6Q9UNH7 406 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
NPC1-201ENST00000269228 PRNPP04156 253 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 FNBP1LQ5T0N5 605 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 ANKRD22Q5VYY1 191 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 CYB5D1Q6P9G0 228 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 ZNF621Q6ZSS3 439 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SEPHS2Q99611 448 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SIX4Q9UIU6 781 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 TBC1D30Q9Y2I9 924 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 MYO9BQ13459 2157 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 PER2O15055 1255 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 KRT20P35900 424 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 VEGFBP49765 207 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SEC13P55735 322 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 VAC14Q08AM6 782 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 LDB1Q86U70 411 aaPredicted RBP13.77□□□□□ -0.21
NPC1-201ENST00000269228 TMPRSS6Q8IU80 811 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 BCO2Q9BYV7 579 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 ZNF446Q9NWS9 450 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 GDAP2Q9NXN4 497 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 SLC12A4Q9UP95 1085 aa13.77□□□□□ -0.21
NPC1-201ENST00000269228 ISM1B1AKI9 464 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms