RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.2□□□□□ -0.143e-6■■□□□ 11.9
SS18-201ENST00000269137 TXNDC16Q9P2K2 825 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 SLC17A6Q9P2U8 582 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 EVLQ9UI08 416 aaPredicted RBP14.2□□□□□ -0.14
SS18-201ENST00000269137 ERVW-1Q9UQF0 538 aa14.2□□□□□ -0.14
SS18-201ENST00000269137 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 TRAFD1O14545 582 aaPredicted RBP14.19□□□□□ -0.14
SS18-201ENST00000269137 SLC7A4O43246 635 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 PGLSO95336 258 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 CRTAMO95727 393 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 ASLP04424 464 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 CHN1P15882 459 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 CSE1LP55060 971 aaKnown RBP14.19□□□□□ -0.14
SS18-201ENST00000269137 SLC18A2Q05940 514 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 BCL2L1Q07817 233 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 MPP2Q14168 576 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 GRIN2CQ14957 1233 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 DLG2Q15700 870 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 QPCTQ16769 361 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 MYLK3Q32MK0 819 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 ARMC12Q5T9G4 340 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 LPCAT1Q8NF37 534 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 TUBGCP5Q96RT8 1024 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 AGAP2Q99490 1192 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 MCMBPQ9BTE3 642 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 CPEB1Q9BZB8 566 aaKnown RBP14.19□□□□□ -0.14
SS18-201ENST00000269137 TNKS2Q9H2K2 1166 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 ATP13A3Q9H7F0 1226 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 KCNK9Q9NPC2 374 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 IARS2Q9NSE4 1012 aaKnown RBP14.19□□□□□ -0.14
SS18-201ENST00000269137 HACD3Q9P035 362 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 SLCO3A1Q9UIG8 710 aa14.19□□□□□ -0.14
SS18-201ENST00000269137 OTOL1A6NHN0 477 aaPredicted RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 FAM47DPA6NHR8 397 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 TYROBPO43914 113 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 SRPRAP08240 638 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 GBP2P32456 591 aaPredicted RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 SPRP35270 261 aaPredicted RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 GUCY1A3Q02108 690 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 ADGRE1Q14246 886 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 TAF1AQ15573 450 aaPredicted RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 CARD16Q5EG05 197 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 STRA8Q7Z7C7 330 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 C12orf40Q86WS4 652 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 CAMK1DQ8IU85 385 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 C4orf33Q8N1A6 199 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 BANPQ8N9N5 519 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 STYXQ8WUJ0 223 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 VOPP1Q96AW1 172 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 SERAC1Q96JX3 654 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 MRGPRX3Q96LB0 322 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 NECTIN4Q96NY8 510 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 RBBP8Q99708 897 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 FAM167BQ9BTA0 163 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 PCDHB9Q9Y5E1 797 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 SPO11Q9Y5K1 396 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 DENND4AQ7Z401 1863 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 C5orf42Q9H799 3197 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 ECI2O75521 394 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 RFPL1O75677 317 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 POP4O95707 220 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 ATP5BP06576 529 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 ITGA2BP08514 1039 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 DLDP09622 509 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 PSMC3P17980 439 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 NNMTP40261 264 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 GRIA4P48058 902 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 THOC5Q13769 683 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 GRM3Q14832 879 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 UGP2Q16851 508 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 MROH9Q5TGP6 573 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 KIAA0408Q6ZU52 694 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 LMNTD2Q8IXW0 634 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 YAF2Q8IY57 180 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 CPA6Q8N4T0 437 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 OR6K2Q8NGY2 324 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 GABPB2Q8TAK5 448 aaPredicted RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 CALML6Q8TD86 181 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 PIH1D2Q8WWB5 315 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 MYO19Q96H55 970 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 PLA2G2FQ9BZM2 168 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 MFSD1Q9H3U5 465 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 INTS9Q9NV88 658 aaKnown RBP14.18□□□□□ -0.14
SS18-201ENST00000269137 DEC1Q9P2X7 70 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 ARL5AQ9Y689 179 aa14.18□□□□□ -0.14
SS18-201ENST00000269137 SRRM3A6NNA2 597 aaPredicted RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 WASH3PC4AMC7 463 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 GOLGA8TH3BQL2 631 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 TIMM44O43615 452 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 PRKCGP05129 697 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 PIRTP0C851 137 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 SERPINA4P29622 427 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 ZNF140P52738 457 aaPredicted RBP14.17□□□□□ -0.14
SS18-201ENST00000269137 LIMK2P53671 638 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 GNGT1P63211 74 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 PDE1BQ01064 536 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 RAD51Q06609 339 aa14.17□□□□□ -0.14
SS18-201ENST00000269137 RUNX3Q13761 415 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms