RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 NCBP2-AS2Q69YL0 99 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NEPROQ6NW34 567 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CLEC20AQ6ZU45 233 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PGAM4Q8N0Y7 254 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RP9Q8TA86 221 aaKnown RBP16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HSFY1Q96LI6 401 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC29A1Q99808 456 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DRC3Q9H069 523 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CRTAC1Q9NQ79 661 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SEPT10Q9P0V9 454 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 VPS28Q9UK41 221 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CNOT11Q9UKZ1 510 aaKnown RBP16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 B3GAT3O94766 335 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NPR3P17342 541 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TKTL1P51854 596 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ART3Q13508 389 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NIPAL1Q6NVV3 410 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 DNAJC5GQ8N7S2 189 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GBA3Q9H227 469 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ATP11BQ9Y2G3 1177 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SCN5AQ14524 2016 aa16.08■□□□□ 0.16
MAP1LC3B-201ENST00000268607 REV3LO60673 3130 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CROCCQ5TZA2 2017 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 A0A0U1RQF3 1178 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GOLGA8TH3BQL2 631 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CHRNGP07510 517 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CD247P20963 164 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ACADSBP45954 432 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CCR10P46092 362 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NUMBP49757 651 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RWDD4Q6NW29 188 aaKnown RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GPRIN1Q7Z2K8 1008 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 GPR141Q7Z602 305 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SIX6OS1Q8N1H7 587 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TBC1D15Q8TC07 691 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CHPT1Q8WUD6 406 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CDKL2Q92772 493 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NPAS2Q99743 824 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 OSBPL11Q9BXB4 747 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TRPV5Q9NQA5 729 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PNPLA3Q9NST1 481 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MFSD11O43934 449 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MPSTP25325 297 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ARL4AP40617 200 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SESN2P58004 480 aaPredicted RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TLE2Q04725 743 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SEPT6Q14141 434 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC25A52Q3SY17 297 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SMUG1Q53HV7 270 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 HEATR6Q6AI08 1181 aaKnown RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM117BQ6P1L5 589 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CCNYQ8ND76 341 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 B3GALT6Q96L58 329 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CIB1Q99828 191 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ULBP1Q9BZM6 244 aa16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 C20orf96Q9NUD7 363 aaPredicted RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MRPL42Q9Y6G3 142 aaKnown RBP16.07■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRUNE2Q8WUY3 3088 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 RALGAPA2Q2PPJ7 1873 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NT5C1B-RDH14C9J2C7 533 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM72CH0Y354 149 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ALDH1A2O94788 518 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 USP17L7P0C7H9 530 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 WARSP23381 471 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRAMEP78395 509 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM72AQ5TYM5 149 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM72DQ6L9T8 149 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CES3Q6UWW8 571 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM72BQ86X60 149 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FIBCD1Q8N539 461 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NDEL1Q9GZM8 345 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PIGVQ9NUD9 493 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FZD10Q9ULW2 581 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 PRG3Q9Y2Y8 225 aaPredicted RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 AP4S1Q9Y587 144 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SNX13Q9Y5W8 968 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 A0A1W2PPW3 197 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 YJEFN3A6XGL0 299 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CNOT3O75175 753 aaKnown RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 BAIAP3O94812 1187 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 ERVK-10P10266 1014 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NAT1P18440 290 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 S100A1P23297 94 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 INSCQ1MX18 579 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 MTX3Q5HYI7 312 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 NXNQ6DKJ4 435 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 LIMS2Q7Z4I7 341 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 CDKL3Q8IVW4 592 aaPredicted RBP16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 TOP6BLQ8N6T0 577 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 FAM47BQ8NA70 645 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC43A3Q8NBI5 491 aa16.06■□□□□ 0.16
MAP1LC3B-201ENST00000268607 SLC7A14Q8TBB6 771 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms