RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 B3GNT5Q9BYG0 378 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ADGRE2Q9UHX3 823 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 FADS3Q9Y5Q0 445 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 VCLP18206 1134 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 IRF8Q02556 426 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 NAB1Q13506 487 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 TAF8Q7Z7C8 310 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 VANGL1Q8TAA9 524 aaPredicted RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 KCNS3Q9BQ31 491 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 TMLHEQ9NVH6 421 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ERGIC3Q9Y282 383 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 H0Y858 1186 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 RECQL4O94761 1208 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ABRQ12979 859 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 MTAPQ13126 283 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 ZDHHC17Q8IUH5 632 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 SLC34A3Q8N130 599 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 BORCS5Q969J3 196 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 OR52E6Q96RD3 313 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 POLR1EQ9GZS1 481 aaKnown RBP12.12□□□□□ -0.47
SMG6-201ENST00000263073 NDOR1Q9UHB4 597 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 TIMM22Q9Y584 194 aa12.12□□□□□ -0.47
SMG6-201ENST00000263073 AREL1O15033 823 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 MXD1Q05195 221 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 KLF10Q13118 480 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PTCHD4Q6ZW05 846 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ARCQ7LC44 396 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 KIAA0319LQ8IZA0 1049 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 C2orf73Q8N5S3 287 aaPredicted RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 MRPL48Q96GC5 212 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 KLHL5Q96PQ7 755 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PANX1Q96RD7 426 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 AHSPQ9NZD4 102 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 TRMUO75648 421 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 HUNKP57058 714 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 NOMO3P69849 1222 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 VPS72Q15906 364 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 UGCGQ16739 394 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PTPRNQ16849 979 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 LIN52Q52LA3 116 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ANKRD22Q5VYY1 191 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 SLC27A1Q6PCB7 646 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 R3HCC1LQ7Z5L2 792 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 OR6K2Q8NGY2 324 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 WNT8BQ93098 351 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 MYLPFQ96A32 169 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 GFM1Q96RP9 751 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 MAT2BQ9NZL9 334 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 MORF4L1Q9UBU8 362 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PCDHB5Q9Y5E4 795 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 B4GALT5O43286 388 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 WFS1O76024 890 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 CETPP11597 493 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ZNF460Q14592 562 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ZNF280DQ6N043 979 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 CUZD1Q86UP6 607 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PALB2Q86YC2 1186 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PIH1D2Q8WWB5 315 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 RTKNQ9BST9 563 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 CNOT6Q9ULM6 557 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 SORCS3Q9UPU3 1222 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 SH3GLB1Q9Y371 365 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 RGL2O15211 777 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 PSMA3P25788 255 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 STARP49675 285 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 RBBP4Q09028 425 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 TIMM50Q3ZCQ8 353 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 OLFML2AQ68BL7 652 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 GPRIN3Q6ZVF9 776 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ZNF438Q7Z4V0 828 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ANKRD13AQ8IZ07 590 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 EIF1ADQ8N9N8 165 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 OR52J3Q8NH60 311 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ART5Q96L15 291 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 HBEGFQ99075 208 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 SPATA31A1Q5TZJ5 1347 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 ACKR2O00590 384 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 CCL22O00626 93 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 CHRNGP07510 517 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 YAP1P46937 504 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 IL18Q14116 193 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 HDAC10Q969S8 669 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 AZIN2Q96A70 460 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 BTBD9Q96Q07 612 aa12.11□□□□□ -0.47
SMG6-201ENST00000263073 MRPL57Q9BQC6 102 aaKnown RBP12.11□□□□□ -0.47
SMG6-201ENST00000263073 YDJCA8MPS7 323 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 FSCN2O14926 492 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 HAT1O14929 419 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 ALOX15BO15296 676 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 OR5F1O95221 314 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 ADCYAP1R1P41586 468 aa12.1□□□□□ -0.47
SMG6-201ENST00000263073 PURAQ00577 322 aaKnown RBP12.1□□□□□ -0.47
SMG6-201ENST00000263073 BEX3Q00994 111 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms