RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 PTGER3P43115 390 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CCNHP51946 323 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CDC42P60953 191 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 LY6KQ17RY6 165 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM192Q8IY95 271 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SVOPLQ8N434 492 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 C4orf32Q8N8J7 132 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 AZIN2Q96A70 460 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CAMK1GQ96NX5 476 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 POLR1BQ9H9Y6 1135 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 GPRC5CQ9NQ84 441 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF112Q9UJU3 913 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHGB1Q9Y5G3 927 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM191CA6NGB0 347 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 MYO1GB0I1T2 1018 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 KERAO60938 352 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 HIST1H2ABP04908 130 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SPATA31C1P0DKV0 1188 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 NR4A1P22736 598 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CAPSQ13938 189 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 USP39Q53GS9 565 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CAPN13Q6MZZ7 669 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 WDR59Q6PJI9 974 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 GPRIN3Q6ZVF9 776 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 HIST3H2AQ7L7L0 130 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 KRT74Q7RTS7 529 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 FAM131BQ86XD5 332 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 IFNL1Q8IU54 200 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 ACOT12Q8WYK0 555 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 HIST1H2ACQ93077 130 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 AHCYL2Q96HN2 611 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CPB2Q96IY4 423 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 TMEM121Q9BTD3 319 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 PAIP2BQ9ULR5 123 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 ZMYND8Q9ULU4 1186 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 MRPS23Q9Y3D9 190 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 MEI4A8MW99 385 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 RPA3P35244 121 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 AQP5P55064 265 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 RAB14P61106 215 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SPIDRQ14159 915 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 ACAP2Q15057 778 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SKIV2LQ15477 1246 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CCDC92Q53HC0 331 aaPredicted RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 MFSD7Q6UXD7 560 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 MON1BQ7L1V2 547 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 IL31RAQ8NI17 732 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CATSPER2Q96P56 530 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 CCM2Q9BSQ5 444 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SENP2Q9HC62 589 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 DDX20Q9UHI6 824 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 ANAPC2Q9UJX6 822 aa4.34□□□□□ -1.72
VPS13C-202ENST00000261517 RUVBL1Q9Y265 456 aaKnown RBP4.34□□□□□ -1.72
VPS13C-202ENST00000261517 SCN7AQ01118 1682 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 E5RJQ4 531 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 KPNA4O00629 521 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 IRF1P10914 325 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PLCL1Q15111 1095 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SLC39A12Q504Y0 691 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ILDR1Q86SU0 546 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PHYKPLQ8IUZ5 450 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CPNE2Q96FN4 548 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 NOD2Q9HC29 1040 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SCAF8Q9UPN6 1271 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 TLR6Q9Y2C9 796 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 UGT2B11O75310 529 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CLPTM1O96005 669 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AP1S2P56377 157 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HABP4Q5JVS0 413 aaKnown RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FNDC5Q8NAU1 212 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ADI1Q9BV57 179 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 DMAC2Q9NW81 257 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MIOSQ9NXC5 875 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 NINJ2Q9NZG7 142 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZNF214Q9UL59 606 aaPredicted RBP4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CFL2Q9Y281 166 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 NR1D2Q14995 579 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PDGFRLQ15198 375 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 VPS26BQ4G0F5 336 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 RELL1Q8IUW5 271 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 FCGR1BQ92637 280 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CRELD1Q96HD1 420 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 COPS8Q99627 209 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ANKZF1Q9H8Y5 726 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 PCDHGA2Q9Y5H1 932 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ALPPL2P10696 532 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 SPAM1P38567 509 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CBWD6Q4V339 395 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ZCWPW2Q504Y3 356 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 TEX44Q53QW1 395 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 MIB1Q86YT6 1006 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 HGH1Q9BTY7 390 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 GLOD4Q9HC38 313 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 ANKHQ9HCJ1 492 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 NECTIN3Q9NQS3 549 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 CPA4Q9UI42 421 aa4.33□□□□□ -1.72
VPS13C-202ENST00000261517 AGO1Q9UL18 857 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms