RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 URGCPQ8TCY9 931 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 EPS8L1Q8TE68 723 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 NSUN6Q8TEA1 469 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 NCSTNQ92542 709 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 FEM1CQ96JP0 617 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 VPS35Q96QK1 796 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 IL22Q9GZX6 179 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 XKR8Q9H6D3 395 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SYNDIG1Q9H7V2 258 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ANKRA2Q9H9E1 313 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SNTG2Q9NY99 539 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PCDHA10Q9Y5I2 948 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TMEM221A6NGB7 291 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L15C9J2P7 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L13C9JLJ4 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L11C9JVI0 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L18D6R9N7 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L22D6RA61 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L17D6RBQ6 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L19D6RCP7 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L20D6RJB6 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 NPHS1O60500 1241 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ECDO95905 644 aaPredicted RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 HPRP00739 348 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ASNSP08243 561 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 NR2F6P10588 404 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PKLRP30613 574 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TCF7P36402 384 aaPredicted RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 MAGEA2P43356 314 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 LSM3P62310 102 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L24Q0WX57 530 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 STARD3Q14849 445 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L6PQ6QN14 398 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PHC2Q8IXK0 858 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SETD6Q8TBK2 473 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 GAB3Q8WWW8 586 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TMEM246Q9BRR3 403 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PPA2Q9H2U2 334 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 SNX9Q9Y5X1 595 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 hCG_1818297A0A087WSY0 165 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 LTA4HP09960 611 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CLCN5P51795 746 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 RHDQ02161 417 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 BST2Q10589 180 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TCEAL1Q15170 157 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 KIZQ2M2Z5 673 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TIGD2Q4W5G0 525 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 C10orf71Q711Q0 1435 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CXXC5Q7LFL8 322 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ERMP1Q7Z2K6 904 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ITIH5Q86UX2 942 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 GPR180Q86V85 440 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 PLCZ1Q86YW0 608 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 MEIOBQ8N635 442 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 COLGALT1Q8NBJ5 622 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 CNDP2Q96KP4 475 aaKnown RBP8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 NT5C1AQ9BXI3 368 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 TPK1Q9H3S4 243 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 MKS1Q9NXB0 559 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 DNAJB9Q9UBS3 223 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 ZNHIT2Q9UHR6 403 aa8.37□□□□□ -1.07
SNCAIP-201ENST00000261367 DISP2A7MBM2 1401 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 F9P00740 461 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CHRNB1P11230 501 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 MYL9P24844 172 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PPP5CP53041 499 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PRKG2Q13237 762 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 DAG1Q14118 895 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SWI5Q1ZZU3 235 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SPDYE7PQ495Y7 208 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ARSHQ5FYA8 562 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ARHGAP36Q6ZRI8 547 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 APTXQ7Z2E3 356 aaKnown RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CLYBLQ8N0X4 340 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 OR5K1Q8NHB7 308 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 HTR3CQ8WXA8 447 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 DIRAS2Q96HU8 199 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 GMCL1Q96IK5 515 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PPP3R2Q96LZ3 170 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PNMA5Q96PV4 448 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ACE2Q9BYF1 805 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 CNOT6Q9ULM6 557 aaKnown RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 MFHAS1Q9Y4C4 1052 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ARAP2Q8WZ64 1704 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 WDR27A2RRH5 827 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 C12orf71A8MTZ7 269 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 C2orf74A8MZ97 194 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 UPP2O95045 317 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PGK1P00558 417 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ITGB3P05106 788 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 M6PRP20645 277 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 KDELR1P24390 212 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 SRP54P61011 504 aaKnown RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ZNF235Q14590 738 aa8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 NFE2Q16621 373 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 ZIK1Q3SY52 487 aaPredicted RBP8.36□□□□□ -1.07
SNCAIP-201ENST00000261367 PLA2G4FQ68DD2 849 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms