RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SUGP1Q8IWZ8 645 aaKnown RBP19.02■□□□□ 0.64
TRIM47-201ENST00000254816 DCLK2Q8N568 766 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 FITM2Q8N6M3 262 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 CCDC63Q8NA47 563 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 IRF7Q92985 503 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 LMLNQ96KR4 655 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 CAB39LQ9H9S4 337 aa19.02■□□□□ 0.64
TRIM47-201ENST00000254816 PAMP19021 973 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 SPRP35270 261 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-201ENST00000254816 STK19P49842 368 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-201ENST00000254816 LIMK2P53671 638 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 TRAF2Q12933 501 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 PPM1JQ5JR12 505 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 PITRM1Q5JRX3 1037 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 COL13A1Q5TAT6 717 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-201ENST00000254816 KIAA0930Q6ICG6 404 aaPredicted RBP19.02■□□□□ 0.63
TRIM47-201ENST00000254816 FSTL4Q6MZW2 842 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 NCEH1Q6PIU2 408 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 ELMSAN1Q6PJG2 1045 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 LPCAT1Q8NF37 534 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 ECT2Q9H8V3 914 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 CD248Q9HCU0 757 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 SPHK2Q9NRA0 654 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 SPO11Q9Y5K1 396 aa19.02■□□□□ 0.63
TRIM47-201ENST00000254816 MROH6A6NGR9 719 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 TM9SF1O15321 606 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 BMP1P13497 986 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 TYRP14679 529 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 GABRB3P28472 473 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 VIPR2P41587 438 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 ARSDP51689 593 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 FUT11Q495W5 492 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 RARS2Q5T160 578 aaKnown RBP19.01■□□□□ 0.63
TRIM47-201ENST00000254816 RETSATQ6NUM9 610 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 TBC1D1Q86TI0 1168 aaPredicted RBP19.01■□□□□ 0.63
TRIM47-201ENST00000254816 PARP9Q8IXQ6 854 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 NAT16Q8N8M0 369 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 PTPRN2Q92932 1015 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 ACDQ96AP0 544 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 RSPRY1Q96DX4 576 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 GDF15Q99988 308 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 TNKS2Q9H2K2 1166 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.01■□□□□ 0.63
TRIM47-201ENST00000254816 PHTF1Q9UMS5 762 aa19.01■□□□□ 0.63
TRIM47-201ENST00000254816 OR51F1A6NGY5 319 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SOBPA7XYQ1 873 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 AURKAO14965 403 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 TRIM24O15164 1050 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 PENKP01210 267 aaPredicted RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 AHSGP02765 367 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 POU2F2P09086 479 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 GKP32189 559 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SLC8A1P32418 973 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SLC1A2P43004 574 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 PGGT1BP53609 377 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 NCALDP61601 193 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 THOC5Q13769 683 aaKnown RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 KCNC3Q14003 757 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 PDK4Q16654 411 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 GALNTL6Q49A17 601 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 ICE2Q659A1 982 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 ADGRG2Q8IZP9 1017 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 MCMBPQ9BTE3 642 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 IQCGQ9H095 443 aaKnown RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 KLHL14Q9P2G3 628 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SZT2Q5T011 3432 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 ETV4P43268 484 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 ELF3P78545 371 aaPredicted RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 NSUN2Q08J23 767 aaKnown RBP eCLIP19■□□□□ 0.63
TRIM47-201ENST00000254816 PDE1CQ14123 709 aaPredicted RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 GRM3Q14832 879 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SLC14A2Q15849 920 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 TRIM68Q6AZZ1 485 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 ZNF470Q6ECI4 717 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 OR13C4Q8NGS5 318 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 MYLIPQ8WY64 445 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 HDAC10Q969S8 669 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 VPS39Q96JC1 886 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 SUDS3Q9H7L9 328 aaPredicted RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 SFXN1Q9H9B4 322 aa19■□□□□ 0.63
TRIM47-201ENST00000254816 EVLQ9UI08 416 aaPredicted RBP19■□□□□ 0.63
TRIM47-201ENST00000254816 A0A0U1RQS6 177 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 SLC4A1P02730 911 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 SAT1P21673 171 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 CES1P23141 567 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 TYK2P29597 1187 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 DLG2Q15700 870 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 RAB30Q15771 203 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 PTAR1Q7Z6K3 402 aaPredicted RBP18.99■□□□□ 0.63
TRIM47-201ENST00000254816 CNTN4Q8IWV2 1026 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 BRSK1Q8TDC3 778 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 LRRC8CQ8TDW0 803 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 DNAJC1Q96KC8 554 aaKnown RBP18.99■□□□□ 0.63
TRIM47-201ENST00000254816 LMAN2LQ9H0V9 348 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 SNX15Q9NRS6 342 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 TBC1D14Q9P2M4 693 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 LINC01565O15544 149 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 ALADP13716 330 aa18.99■□□□□ 0.63
TRIM47-201ENST00000254816 CSE1LP55060 971 aaKnown RBP18.99■□□□□ 0.63
TRIM47-201ENST00000254816 KCNJ2P63252 427 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms