RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TNNT1P13805 278 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 CYLC1P35663 651 aaPredicted RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 NOP2P46087 812 aaKnown RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 RABIFP47224 123 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 LIG3P49916 1009 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 RALGDSQ12967 914 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 SPA17Q15506 151 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 IFI16Q16666 785 aaKnown RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 ZNF542PQ5EBM4 170 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 DCP2Q8IU60 420 aaKnown RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 SLC25A45Q8N413 288 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 PLD5Q8N7P1 536 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 GOLPH3Q9H4A6 298 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 FTSJ1Q9UET6 329 aa23.11■■□□□ 1.29
LSM4-201ENST00000252816 APOBEC2Q9Y235 224 aaKnown RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 EPN1Q9Y6I3 576 aaPredicted RBP23.11■■□□□ 1.29
LSM4-201ENST00000252816 ARID1BQ8NFD5 2236 aaPredicted RBP23.1■■□□□ 1.29
LSM4-201ENST00000252816 SPTY2D1-AS1A0A0U1RR47 76 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 GOLGA8CPA6NN73 597 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 MATN3O15232 486 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 DKK1O94907 266 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 KRT1P04264 644 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 TRAF2Q12933 501 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 VSIG1Q86XK7 387 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 TMTC1Q8IUR5 882 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 RHOT1Q8IXI2 618 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 ADAMTS14Q8WXS8 1223 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 SPOCK2Q92563 424 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 C1QTNF7Q9BXJ2 289 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 UCKL1Q9NWZ5 548 aa23.1■■□□□ 1.29
LSM4-201ENST00000252816 LRRK1Q38SD2 2015 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 AKAP13Q12802 2813 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 RCCD1A6NED2 376 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 SPOPO43791 374 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 SOCS5O75159 536 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 NDUFA10O95299 355 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 DGKAP23743 735 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 CCNCP24863 283 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 PDE1CQ14123 709 aaPredicted RBP23.09■■□□□ 1.29
LSM4-201ENST00000252816 IHHQ14623 411 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 IRF4Q15306 451 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 WSCD2Q2TBF2 565 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 SLC9A4Q6AI14 798 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 TIGD7Q6NT04 549 aaPredicted RBP23.09■■□□□ 1.29
LSM4-201ENST00000252816 PAF1Q8N7H5 531 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 PDCD6IPQ8WUM4 868 aaKnown RBP23.09■■□□□ 1.29
LSM4-201ENST00000252816 FATE1Q969F0 183 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 RNF25Q96BH1 459 aaPredicted RBP23.09■■□□□ 1.29
LSM4-201ENST00000252816 IFT43Q96FT9 208 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 DNAJC28Q9NX36 388 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 KLF15Q9UIH9 416 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 SALL4Q9UJQ4 1053 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 KLK13Q9UKR3 277 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 REXO2Q9Y3B8 237 aaKnown RBP23.09■■□□□ 1.29
LSM4-201ENST00000252816 ALG6Q9Y672 507 aa23.09■■□□□ 1.29
LSM4-201ENST00000252816 COL5A1P20908 1838 aaPredicted RBP23.08■■□□□ 1.29
LSM4-201ENST00000252816 A0A0A6YYK5 440 aaPredicted RBP23.08■■□□□ 1.29
LSM4-201ENST00000252816 A8MX80 341 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 PIAS2O75928 621 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 MX2P20592 715 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 POLR2LP62875 67 aaKnown RBP23.08■■□□□ 1.29
LSM4-201ENST00000252816 RALGPS1Q5JS13 557 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 MFSD7Q6UXD7 560 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 RAD9BQ6WBX8 426 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 LIPIQ6XZB0 460 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 DPPA4Q7L190 304 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 HDAC11Q96DB2 347 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 CNDP2Q96KP4 475 aaKnown RBP23.08■■□□□ 1.29
LSM4-201ENST00000252816 LGMNQ99538 433 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 SEMA3CQ99985 751 aa23.08■■□□□ 1.29
LSM4-201ENST00000252816 RBM22Q9NW64 420 aaKnown RBP eCLIP23.08■■□□□ 1.29
LSM4-201ENST00000252816 DDX56Q9NY93 547 aaKnown RBP23.08■■□□□ 1.29
LSM4-201ENST00000252816 TRIM38O00635 465 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 LZTS3O60299 673 aaPredicted RBP23.07■■□□□ 1.28
LSM4-201ENST00000252816 LDOC1O95751 146 aaPredicted RBP23.07■■□□□ 1.28
LSM4-201ENST00000252816 CCNB1P14635 433 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 GM2AP17900 193 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 EIF2B5Q13144 721 aaKnown RBP23.07■■□□□ 1.28
LSM4-201ENST00000252816 DNAJC3Q13217 504 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 LRRC14Q15048 493 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 AGERQ15109 404 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 ALG1LQ6GMV1 187 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 PARGQ86W56 976 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.07■■□□□ 1.28
LSM4-201ENST00000252816 B4GALT6Q9UBX8 382 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 HEY1Q9Y5J3 304 aa23.07■■□□□ 1.28
LSM4-201ENST00000252816 TDRD6O60522 2096 aaKnown RBP23.07■■□□□ 1.28
LSM4-201ENST00000252816 CFAP69A5D8W1 941 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 ENC1O14682 589 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 APOL1O14791 398 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 PGLSO95336 258 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 CPP00450 1065 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 CSF2P04141 144 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 HLA-DQB2P05538 268 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 GIMD1P0DJR0 217 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 NME1P15531 152 aaKnown RBP23.06■■□□□ 1.28
LSM4-201ENST00000252816 DSC2Q02487 901 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 ITKQ08881 620 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 TAZQ16635 292 aa23.06■■□□□ 1.28
LSM4-201ENST00000252816 FAM182AQ5T1J6 154 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms