RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 RAP1GAP2Q684P5 730 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 IQSEC1Q6DN90 963 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FNDC5Q8NAU1 212 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MTMR14Q8NCE2 650 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ADCY4Q8NFM4 1077 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 OR9Q1Q8NGQ5 310 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PTCD3Q96EY7 689 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PIWIL1Q96J94 861 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 BTBD9Q96Q07 612 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PLGRKTQ9HBL7 147 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 IRS2Q9Y4H2 1338 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SLX4Q8IY92 1834 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SMIM28A0A1B0GU29 152 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 OR6B1O95007 311 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ATG7O95352 703 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HGFP14210 728 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LSM12Q3MHD2 195 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 LDLRAP1Q5SW96 308 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF618Q5T7W0 954 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 C16orf59Q7L2K0 433 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF276Q8N554 614 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GTF3C2Q8WUA4 911 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MAML3Q96JK9 1138 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HAPLN2Q9GZV7 340 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ADARB2Q9NS39 739 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PCDHGB4Q9UN71 923 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PIKFYVEQ9Y2I7 2098 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 KANSL1LA0AUZ9 987 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TRMUO75648 421 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CKMT2P17540 419 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 HLA-DPA1P20036 260 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CYP3A5P20815 502 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SOAT1P35610 550 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 PPP3CCP48454 512 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SLC11A2P49281 568 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CTXN3Q4LDR2 81 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SYTL3Q4VX76 610 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SYPL2Q5VXT5 272 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ATG16L2Q8NAA4 619 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CLHC1Q8NHS4 586 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MCRS1Q96EZ8 462 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TPD52L3Q96J77 140 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FCRL2Q96LA5 508 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 STRA6Q9BX79 667 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 GIMAP2Q9UG22 337 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF214Q9UL59 606 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SLC27A5Q9Y2P5 690 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ARAP2Q8WZ64 1704 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MAST2Q6P0Q8 1798 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 S100A5P33763 92 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FAM35AQ86V20 835 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CLK4Q9HAZ1 481 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM165Q9HC07 324 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SEMA4BQ9NPR2 832 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 CDH9Q9ULB4 789 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 A6NHS1 94 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FGF3P11487 239 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 ALOX12P18054 663 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 RAB27AP51159 221 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 RBM20Q5T481 1227 aaKnown RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 REP15Q6BDI9 236 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 UTS2BQ765I0 119 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 SMARCD1Q96GM5 515 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 FZD10Q9ULW2 581 aa4.64□□□□□ -1.67
VPS13C-201ENST00000249837 MAFBQ9Y5Q3 323 aaPredicted RBP4.64□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM247A6NEH6 219 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 MOXD2PA6NHM9 499 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PLSCR1O15162 318 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GSNP06396 782 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PRDX6P30041 224 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 OR1E1P30953 314 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PTPN9P43378 593 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 LIMK2P53671 638 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ZNF252P-AS1Q0IIN9 211 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PWP1Q13610 501 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CTU1Q7Z7A3 348 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CIR1Q86X95 450 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 TMEM86AQ8N2M4 240 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 OR56A4Q8NGH8 313 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 RDH11Q8TC12 318 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ELOVL6Q9H5J4 265 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 BPIFA1Q9NP55 256 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CFAP99D6REC4 459 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 FFAR3O14843 346 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 GPR42O15529 346 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CCT8P50990 548 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 PITX1P78337 314 aaPredicted RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 VEPH1Q14D04 833 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 AARS2Q5JTZ9 985 aaKnown RBP4.63□□□□□ -1.67
VPS13C-201ENST00000249837 STXBP5Q5T5C0 1151 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 METTL21CQ5VZV1 264 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 SLC9A4Q6AI14 798 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 CAMK1DQ8IU85 385 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DNAJC5Q9H3Z4 198 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 ZFP14Q9HCL3 533 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DAPK2Q9UIK4 370 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 VPS9D1Q9Y2B5 631 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 NRP1O14786 923 aa4.63□□□□□ -1.67
VPS13C-201ENST00000249837 DLX3O60479 287 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms