RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 PLXNA3P51805 1871 aa21.78■■□□□ 1.08
SH2D3A-201ENST00000245908 BCAS2O75934 225 aaPredicted RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 KCNA5P22460 613 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 FOLH1Q04609 750 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 YWHAHQ04917 246 aaPredicted RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 PDK3Q15120 406 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 MSANTD2Q6P1R3 559 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 FBXL19Q6PCT2 694 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 ZNF683Q8IZ20 524 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 PIP4K2CQ8TBX8 421 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 NPAS2Q99743 824 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 ADAM2Q99965 735 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 UPF3AQ9H1J1 476 aaKnown RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 MEAF6Q9HAF1 191 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 EML4Q9HC35 981 aaKnown RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 NT5MQ9NPB1 228 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 PRDM5Q9NQX1 630 aaPredicted RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 UTP6Q9NYH9 597 aaKnown RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 RIMS3Q9UJD0 308 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 CAPN8A6NHC0 703 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 RBP1P09455 135 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 RARS2Q5T160 578 aaKnown RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 KLC3Q6P597 504 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 SCN4BQ8IWT1 228 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 AFAP1L2Q8N4X5 818 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 BHLHE22Q8NFJ8 381 aaPredicted RBP21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 OR13J1Q8NGT2 312 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 SPPL2BQ8TCT7 592 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 UBXN10Q96LJ8 280 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 COMMD3-BMI1R4GMX3 469 aa21.77■■□□□ 1.08
SH2D3A-201ENST00000245908 TTC3P53804 2025 aa21.77■■□□□ 1.07
SH2D3A-201ENST00000245908 STX16-NPEPL1H3BU86 382 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 TNPO2O14787 897 aaKnown RBP21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 OR4Q2P0C623 313 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CCDC166P0CW27 439 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 LPIN1Q14693 890 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 LIN52Q52LA3 116 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 RASIP1Q5U651 963 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 HMCESQ96FZ2 354 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 LRGUKQ96M69 825 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CENPKQ9BS16 269 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CYP4F12Q9HCS2 524 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 TMCO1Q9UM00 188 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 SCML2Q9UQR0 700 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 ACOT8O14734 319 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 AP1G1O43747 822 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 MMP2P08253 660 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 RHOQP17081 205 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CD86P42081 329 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 GALNT1Q10472 559 aaPredicted RBP21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 ACAP2Q15057 778 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 HECTD2Q5U5R9 776 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 UGT2A3Q6UWM9 527 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 GK5Q6ZS86 529 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 TICAM1Q8IUC6 712 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 RNF135Q8IUD6 432 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CILP2Q8IUL8 1156 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 CATSPER1Q8NEC5 780 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 GCNAQ96QF7 691 aa21.76■■□□□ 1.07
SH2D3A-201ENST00000245908 PRSS51A0A1B0GVH4 220 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 J3KR12 359 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TRIM38O00635 465 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TXNDC9O14530 226 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SLC7A4O43246 635 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 DENRO43583 198 aaKnown RBP21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 WISP3O95389 354 aaPredicted RBP21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SLC2A3P11169 496 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 CYBAP13498 195 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MSX2P35548 267 aaPredicted RBP21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 CHN2P52757 468 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SQLEQ14534 574 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SLC39A12Q504Y0 691 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MARC1Q5VT66 337 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 CUZD1Q86UP6 607 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MON1AQ86VX9 555 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SLC22A9Q8IVM8 553 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MARVELD2Q8N4S9 558 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 RNF148Q8N7C7 305 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TMA16Q96EY4 203 aaKnown RBP21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MRPL1Q9BYD6 325 aaKnown RBP21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TNFRSF12AQ9NP84 129 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TMEM248Q9NWD8 314 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 PSMD8P48556 350 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 INHBCP55103 352 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MAXP61244 160 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SLC10A7Q0GE19 358 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 TFAP2DQ7Z6R9 452 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 SPNS2Q8IVW8 549 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 HMGCLL1Q8TB92 370 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 ZYG11BQ9C0D3 744 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MFSD1Q9H3U5 465 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 FIS1Q9Y3D6 152 aa21.75■■□□□ 1.07
SH2D3A-201ENST00000245908 MROH6A6NGR9 719 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 INPPL1O15357 1258 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 HAPLN1P10915 354 aaPredicted RBP21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 C1QTNF8P60827 252 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 DSC2Q02487 901 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 TNK2Q07912 1038 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 ITKQ08881 620 aa21.74■■□□□ 1.07
SH2D3A-201ENST00000245908 LSAMPQ13449 338 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms