RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PTPRN2Q92932 1015 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 IMP4Q96G21 291 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 SPATA16Q9BXB7 569 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 IQCGQ9H095 443 aaKnown RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 AASDHPPTQ9NRN7 309 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 KIAA1671Q9BY89 1806 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZNF217O75362 1048 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZXDAP98168 799 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 FSTL4Q6MZW2 842 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 EMBQ6PCB8 327 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 GBF1Q92538 1859 aa11.2□□□□□ -0.62
TNFAIP3-201ENST00000237289 MID1O15344 667 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 BUD23O43709 281 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 BMP1P13497 986 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 ADRA1DP25100 572 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MSH2P43246 934 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 RPL26P61254 145 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 SATB1Q01826 763 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 SEMA5AQ13591 1074 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MRNIPQ6NTE8 343 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 NCEH1Q6PIU2 408 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 TPSD1Q9BZJ3 242 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MMP17Q9ULZ9 603 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 CYP8B1Q9UNU6 501 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 RPL26L1Q9UNX3 145 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 DOCK6Q96HP0 2047 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 ALOX15BO15296 676 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 TARSP26639 723 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 AARS2Q5JTZ9 985 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 RASSF3Q86WH2 238 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 RAB7BQ96AH8 199 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 BPIFA1Q9NP55 256 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PRSS16Q9NQE7 514 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 ANKRD66B4E2M5 251 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PRKCGP05129 697 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 STX2P32856 288 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MAGEA9P43362 315 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 GRIA4P48058 902 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 THOP1P52888 689 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PMS2P54278 862 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZBTB16Q05516 673 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 C3orf62Q6ZUJ4 267 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 CROCCP2Q86T23 111 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 FBXO36Q8NEA4 188 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MYOCQ99972 504 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 STMN4Q9H169 189 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 FBRSL1Q9HCM7 1045 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 EIF3HO15372 352 aaKnown RBP eCLIP11.19□□□□□ -0.622e-7■■■□□ 18.4
TNFAIP3-201ENST00000237289 SPAG6O75602 509 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PGLSO95336 258 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 EPOP01588 193 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PRKCHP24723 683 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 OXTRP30559 389 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MAT2AP31153 395 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 PTGIRP43119 386 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 GPR1P46091 355 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 SIX1Q15475 284 aaPredicted RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 RAET1GQ6H3X3 334 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 LRRC8BQ6P9F7 803 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 GSPT2Q8IYD1 628 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 OR2A12Q8NGT7 310 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 CPT1BQ92523 772 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 EIF2B3Q9NR50 452 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 KCTD5Q9NXV2 234 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 FBXO10Q9UK96 956 aa11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 MKI67P46013 3256 aaKnown RBP11.19□□□□□ -0.62
TNFAIP3-201ENST00000237289 EXOC1LA0A1B0GW35 172 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SLC31A1O15431 190 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 TM7SF2O76062 418 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 KRT15P19012 456 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CSNK1DP48730 415 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 DRG2P55039 364 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 UGP2Q16851 508 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 AFMIDQ63HM1 303 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 DUPD1Q68J44 220 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 PPM1NQ8N819 430 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 TMIEQ8NEW7 156 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SLCO2A1Q92959 643 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 LRRC39Q96DD0 335 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 VPS39Q96JC1 886 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 APPL1Q9UKG1 709 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CHRNA4P43681 627 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 PXNP49023 591 aaPredicted RBP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SEMG2Q02383 582 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 NIPAL4Q0D2K0 466 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 STAT4Q14765 748 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SLC1A5Q15758 541 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 SPEM1Q8N4L4 309 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 GLIS1Q8NBF1 620 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 MCUQ8NE86 351 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 CPEB1Q9BZB8 566 aaKnown RBP11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 LHX3Q9UBR4 397 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 VPS9D1Q9Y2B5 631 aa11.18□□□□□ -0.62
TNFAIP3-201ENST00000237289 E5RI56 91 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms