RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 REP15Q6BDI9 236 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 CD300LGQ6UXG3 332 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 C14orf80Q86SX3 495 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 RNF135Q8IUD6 432 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 CNBD2Q96M20 576 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 RANBP9Q96S59 729 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 UNC93B1Q9H1C4 597 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 SLC25A51Q9H1U9 297 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 ZNF696Q9H7X3 374 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 TRPC7Q9HCX4 862 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 ATP13A1Q9HD20 1204 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 OSER1Q9NX31 292 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 MPP6Q9NZW5 540 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 EPS15L1Q9UBC2 864 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 IPO11Q9UI26 975 aaKnown RBP16.38■□□□□ 0.21
LTBR-201ENST00000228918 HS3ST4Q9Y661 456 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 TLL2Q9Y6L7 1015 aa16.38■□□□□ 0.21
LTBR-201ENST00000228918 E7ENX8 843 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 FBP2O00757 339 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 MOCS2O96007 188 aaPredicted RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 PEX11BO96011 259 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 TFAP2AP05549 437 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 C8BP07358 591 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 CCDC166P0CW27 439 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 RPL5P46777 297 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 CDKL1Q00532 357 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 PDAP1Q13442 181 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 TRIM25Q14258 630 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 FASTKQ14296 549 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 KLC3Q6P597 504 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 RPS27LQ71UM5 84 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 MRPL10Q7Z7H8 261 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 LRRC49Q8IUZ0 686 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 HASPINQ8TF76 798 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 TSPAN17Q96FV3 270 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 UBXN10Q96LJ8 280 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 SENP6Q9GZR1 1112 aaPredicted RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 MRPL40Q9NQ50 206 aaKnown RBP16.37■□□□□ 0.21
LTBR-201ENST00000228918 PLK2Q9NYY3 685 aa16.37■□□□□ 0.21
LTBR-201ENST00000228918 M0QZQ0 153 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 PSMD12O00232 456 aaPredicted RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 TRIM24O15164 1050 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 UBDO15205 165 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 TNFAIP8O95379 198 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 CLPTM1O96005 669 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 POMCP01189 267 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 RBP1P09455 135 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 SERPINH1P50454 418 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 PLK1P53350 603 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 NRG1Q02297 640 aaPredicted RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 GALNT1Q10472 559 aaPredicted RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 GK3PQ14409 553 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 PPP1R3AQ16821 1122 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 HECTD2Q5U5R9 776 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 IL23RQ5VWK5 629 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 SCD5Q86SK9 330 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 KLHL23Q8NBE8 558 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 OR13J1Q8NGT2 312 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 TOP1MTQ969P6 601 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 ATP6V1E2Q96A05 226 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 MRPS26Q9BYN8 205 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 NOL6Q9H6R4 1146 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 CNOT11Q9UKZ1 510 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 PHF24Q9UPV7 400 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 LZTS1Q9Y250 596 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 TTC3P53804 2025 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 DOCK4Q8N1I0 1966 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 WASH4PA8MWX3 477 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 TNFRSF10BO14763 440 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 CHRNA1P02708 482 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 ACAP2Q15057 778 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 AGKQ53H12 422 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 C6orf52Q5T4I8 152 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 SPRYD7Q5W111 196 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 OVOS1Q6IE37 1185 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 GALNT7Q86SF2 657 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 GALNT4Q8N4A0 578 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 ANKRD49Q8WVL7 239 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 IMP4Q96G21 291 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 GSTO2Q9H4Y5 243 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 NMUR1Q9HB89 426 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 CHCHD3Q9NX63 227 aaKnown RBP16.36■□□□□ 0.21
LTBR-201ENST00000228918 NUDT5Q9UKK9 219 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 DSEQ9UL01 958 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 SCN10AQ9Y5Y9 1956 aa16.36■□□□□ 0.21
LTBR-201ENST00000228918 MYADML2A6NDP7 307 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 WISP3O95389 354 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 PENKP01210 267 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 HDCP19113 662 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 SH3BGRP55822 239 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 MAPRE1Q15691 268 aaKnown RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 USP41Q3LFD5 358 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 ISLR2Q6UXK2 745 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 CILP2Q8IUL8 1156 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 SLC22A9Q8IVM8 553 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 GABPB2Q8TAK5 448 aaPredicted RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 PHF21BQ96EK2 531 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 ZFRQ96KR1 1074 aaKnown RBP16.35■□□□□ 0.21
LTBR-201ENST00000228918 SLC2A11Q9BYW1 496 aa16.35■□□□□ 0.21
LTBR-201ENST00000228918 PCDHAC1Q9H158 963 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms