RNA–Protein interactions for RNA: ENST00000227524.8

PRPF19-201, Transcript of pre-mRNA processing factor 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF19, Length 2,157 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-201ENST00000227524 LMCD1Q9NZU5 365 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CCDC167Q9P0B6 97 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 SLC2A6Q9UGQ3 507 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 MYRFQ9Y2G1 1151 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 GMEB1Q9Y692 573 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 hCG_2014768A0A024R1R8 64 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 USP17L7P0C7H9 530 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CDK9P50750 372 aaKnown RBP17.6■□□□□ 0.41
PRPF19-201ENST00000227524 ZNF135P52742 658 aaPredicted RBP17.6■□□□□ 0.41
PRPF19-201ENST00000227524 EMP3P54852 163 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 FCGRTP55899 365 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 COG7P83436 770 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CDC42EP1Q00587 391 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 DCTN2Q13561 401 aaKnown RBP17.6■□□□□ 0.41
PRPF19-201ENST00000227524 PPP1R3AQ16821 1122 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 TECRLQ5HYJ1 363 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 C6orf10Q5SRN2 563 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 DENND5AQ6IQ26 1287 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 ZNF280DQ6N043 979 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CYP2R1Q6VVX0 501 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 AFAP1L2Q8N4X5 818 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 C2CD4AQ8NCU7 369 aaPredicted RBP17.6■□□□□ 0.41
PRPF19-201ENST00000227524 RIN3Q8TB24 985 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CIB1Q99828 191 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 SMOQ99835 787 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 TKTL2Q9H0I9 626 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CAAP1Q9H8G2 361 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 CYP4F12Q9HCS2 524 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 PIN4Q9Y237 131 aaKnown RBP17.6■□□□□ 0.41
PRPF19-201ENST00000227524 TCAF1Q9Y4C2 921 aa17.6■□□□□ 0.41
PRPF19-201ENST00000227524 MRASO14807 208 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 PFKPQ01813 784 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 SNX17Q15036 470 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 ZNF470Q6ECI4 717 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 KRT80Q6KB66 452 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 ARHGAP36Q6ZRI8 547 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 ERI1Q8IV48 349 aaKnown RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 GRIN3AQ8TCU5 1115 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 LZICQ8WZA0 190 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 PBXIP1Q96AQ6 731 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 WDCPQ9H6R7 721 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CRTAC1Q9NQ79 661 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CNGB3Q9NQW8 809 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 OLAHQ9NV23 265 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 A8MT66 165 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 HTRA2O43464 458 aaPredicted RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 SRP72O76094 671 aaKnown RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 SNRPB2P08579 225 aaKnown RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CPB1P15086 417 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 KCNA5P22460 613 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CXCR3P49682 368 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 SLC12A2P55011 1212 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 POU4F1Q01851 419 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 PRKCZQ05513 592 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CSHL1Q14406 222 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 FAM45BPQ6NSW5 357 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 CUZD1Q86UP6 607 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 FAM45AQ8TCE6 357 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 EDEM1Q92611 657 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 RMND5BQ96G75 393 aaPredicted RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 FCRL5Q96RD9 977 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 KATNAL1Q9BW62 490 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 EML4Q9HC35 981 aaKnown RBP17.59■□□□□ 0.41
PRPF19-201ENST00000227524 TMEM181Q9P2C4 612 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 SQORQ9Y6N5 450 aa17.59■□□□□ 0.41
PRPF19-201ENST00000227524 C17orf102A2RUQ5 167 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 DFFAO00273 331 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 PLOD2O00469 737 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 GABRDO14764 452 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 F9P00740 461 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 CCDC166P0CW27 439 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 ZNF33AQ06730 810 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 EML3Q32P44 896 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 SAMD4BQ5PRF9 694 aaKnown RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 RBM20Q5T481 1227 aaKnown RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 BTBD8Q5XKL5 378 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 PM20D1Q6GTS8 502 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 C8orf82Q6P1X6 216 aaPredicted RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 RPS27LQ71UM5 84 aaKnown RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 LPCAT2Q7L5N7 544 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 FAM35AQ86V20 835 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 SPNS2Q8IVW8 549 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 SNX31Q8N9S9 440 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 ZMIZ2Q8NF64 920 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 ZNF419Q96HQ0 510 aaPredicted RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 EFHD1Q9BUP0 239 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 ANKRD60Q9BZ19 345 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 NOL11Q9H8H0 719 aaKnown RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 MRM3Q9HC36 420 aaKnown RBP17.58■□□□□ 0.4
PRPF19-201ENST00000227524 GLOD4Q9HC38 313 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 CHST12Q9NRB3 414 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 TMEM30AQ9NV96 361 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 RRN3Q9NYV6 651 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 HACD3Q9P035 362 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 CROTQ9UKG9 612 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 FBXO5Q9UKT4 447 aa17.58■□□□□ 0.4
PRPF19-201ENST00000227524 CASP8AP2Q9UKL3 1982 aa17.57■□□□□ 0.4
PRPF19-201ENST00000227524 PFDN1O60925 122 aa17.57■□□□□ 0.4
PRPF19-201ENST00000227524 AOC2O75106 756 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms