RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 TCAF1Q9Y4C2 921 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 CSADQ9Y600 493 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 A0A1W2PQ67 120 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 SDHDO14521 159 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 LGALS2P05162 132 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 ALDH4A1P30038 563 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 LRP8Q14114 963 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 FASTKQ14296 549 aaKnown RBP14.19□□□□□ -0.14
SF1-201ENST00000227503 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 ZDHHC17Q8IUH5 632 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 CLIP4Q8N3C7 705 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 PBXIP1Q96AQ6 731 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 CLIP3Q96DZ5 547 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 IL12RB2Q99665 862 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 UNC93B1Q9H1C4 597 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 DTLQ9NZJ0 730 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 DNMT3BQ9UBC3 853 aaKnown RBP14.19□□□□□ -0.14
SF1-201ENST00000227503 SNX9Q9Y5X1 595 aa14.19□□□□□ -0.14
SF1-201ENST00000227503 TRIM64CA6NLI5 447 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SNAP91O60641 907 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 TOMM70O94826 608 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 MYO1DO94832 1006 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 CHRM3P20309 590 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 LRPAP1P30533 357 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 NR4A2P43354 598 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 CAPRIN1Q14444 709 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 INAVAQ3KP66 663 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 TIGD2Q4W5G0 525 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 NCBP2-AS2Q69YL0 99 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 RNF19BQ6ZMZ0 732 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ERMP1Q7Z2K6 904 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 IFNEQ86WN2 208 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 CMTR2Q8IYT2 770 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 CNTD1Q8N815 330 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ZC3H15Q8WU90 426 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 DGCR6LQ9BY27 220 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 IARS2Q9NSE4 1012 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 IFT80Q9P2H3 777 aaPredicted RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 GIMAP2Q9UG22 337 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SCN1AP35498 2009 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 H0YJX3 145 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 KCNK1O00180 336 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 MRASO14807 208 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 CLPXO76031 633 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ESRRBO95718 433 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 MTHFD1P11586 935 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 PLK1P53350 603 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 AQP6Q13520 282 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 GRM3Q14832 879 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 OXA1LQ15070 435 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SOWAHAQ2M3V2 549 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SLC36A3Q495N2 470 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SMUG1Q53HV7 270 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 CCDC185Q8N715 623 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 PNPLA1Q8N8W4 532 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 TNIP2Q8NFZ5 429 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 HTR3CQ8WXA8 447 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ITPKCQ96DU7 683 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 OTUD5Q96G74 571 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ZMAT2Q96NC0 199 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 LHPPQ9H008 270 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 ELP3Q9H9T3 547 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 SPAG4Q9NPE6 437 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 WARS2Q9UGM6 360 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 RUVBL2Q9Y230 463 aaKnown RBP14.18□□□□□ -0.14
SF1-201ENST00000227503 TRAF6Q9Y4K3 522 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 USP3Q9Y6I4 520 aa14.18□□□□□ -0.14
SF1-201ENST00000227503 OTOFQ9HC10 1997 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 SYNJ2BP-COX16A0A087WUM0 186 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 ZNF701M0R085 212 aaPredicted RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 SYNCRIPO60506 623 aaKnown RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 JRKO75564 520 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 GOT1P17174 413 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 YWHAQP27348 245 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 EEF1DP29692 281 aaKnown RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 GNL1P36915 607 aaPredicted RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 LIMK2P53671 638 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 LSM3P62310 102 aaKnown RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 RFTN1Q14699 578 aaPredicted RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 LIPMQ5VYY2 423 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 CNSTQ6PJW8 725 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 SLC26A9Q7LBE3 791 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 TMEM151AQ8N4L1 468 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 ANKFN1Q8N957 763 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 CCNYQ8ND76 341 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 SHCBP1Q8NEM2 672 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 ZNF420Q8TAQ5 688 aaPredicted RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 USP33Q8TEY7 942 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 CAPSLQ8WWF8 208 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 DPEP3Q9H4B8 488 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 SPON1Q9HCB6 807 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 CHRAC1Q9NRG0 131 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 TUBA8Q9NY65 449 aaPredicted RBP14.17□□□□□ -0.14
SF1-201ENST00000227503 COX16Q9P0S2 106 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 PLXNA1Q9UIW2 1896 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 RNF103O00237 685 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 HCRTO43612 131 aa14.17□□□□□ -0.14
SF1-201ENST00000227503 DLX3O60479 287 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms