RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 EBF3Q9H4W6 596 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 RIMKLBQ9ULI2 386 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 JUNP05412 331 aaKnown RBP22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 CCDC166P0CW27 439 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 PBX3P40426 434 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 MAPKAPK2P49137 400 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 DSC2Q02487 901 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 ACVR1Q04771 509 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 STX5Q13190 355 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 MED21Q13503 144 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 DDR2Q16832 855 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 SFT2D3Q587I9 215 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 LPCAT4Q643R3 524 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 TMEM198Q66K66 360 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 TFAP2DQ7Z6R9 452 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 ZNF280BQ86YH2 543 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 EFCAB3Q8N7B9 438 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 HIPK4Q8NE63 616 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 ARRDC2Q8TBH0 407 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 SGF29Q96ES7 293 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 YIPF3Q9GZM5 350 aa22.1■■□□□ 1.13
SMARCD2-201ENST00000225742 TCAF2A6NFQ2 919 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 OR6C75A6NL08 312 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 AURKAO14965 403 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 S1PR4O95977 384 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 EPOP01588 193 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 UBTFL6P0CB48 400 aaPredicted RBP22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 HAPLN1P10915 354 aaPredicted RBP22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 IMPDH1P20839 514 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 YWHAQP27348 245 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 PEX2P28328 305 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 CACNB2Q08289 660 aaPredicted RBP22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 EFEMP1Q12805 493 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 FLOT2Q14254 428 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 ALFQ53S48 1182 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 SIRPB2Q5JXA9 342 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 GPR150Q8NGU9 434 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 SPPL2BQ8TCT7 592 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 PABPC5Q96DU9 382 aaKnown RBP22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 FEM1CQ96JP0 617 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 NDNQ99608 321 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 MRPL1Q9BYD6 325 aaKnown RBP22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 GABRQQ9UN88 632 aa22.09■■□□□ 1.13
SMARCD2-201ENST00000225742 BCAS2O75934 225 aaPredicted RBP22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 CNTN5O94779 1100 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 IGLV3-27P01718 113 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 HLA-DPA1P20036 260 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 PSMD8P48556 350 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 FLT3LGP49771 235 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 THOP1P52888 689 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 PRAMEP78395 509 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 RING1Q06587 406 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 ZNF789Q5FWF6 425 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 CLLU1OSQ5K130 101 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 FBXL22Q6P050 247 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 CUZD1Q86UP6 607 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 ICA1LQ8NDH6 482 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 PSMG2Q969U7 264 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 L3HYPDHQ96EM0 354 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 KLHL5Q96PQ7 755 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 RETREG1Q9H6L5 497 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 POPDC3Q9HBV1 291 aa22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 TLR8Q9NR97 1041 aaKnown RBP22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMARCD2-201ENST00000225742 CA12O43570 354 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 B4GALT3O60512 393 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 RAMP2O60895 175 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 FGF1P05230 155 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 ATXN1LP0C7T5 689 aaKnown RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 COL6A1P12109 1028 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 ENO3P13929 434 aaPredicted RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 OR1G1P47890 313 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 ALDH1A3P47895 512 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 CLCN2P51788 898 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 NFKB2Q00653 900 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 SERINC3Q13530 473 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 POLD3Q15054 466 aaPredicted RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 VARS2Q5ST30 1063 aaKnown RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 SDHAF4Q5VUM1 108 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 RTN4RL1Q86UN2 441 aaPredicted RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 FBXO32Q969P5 355 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 ZNF599Q96NL3 588 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 GBP5Q96PP8 586 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 FAM193BQ96PV7 902 aaPredicted RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 ASB2Q96Q27 587 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 UXTQ9UBK9 157 aaPredicted RBP22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 DTNAQ9Y4J8 743 aa22.08■■□□□ 1.12
SMARCD2-201ENST00000225742 TMEM233B4DJY2 109 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 TRIM38O00635 465 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 AHCYL1O43865 530 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 HNRNPLP14866 589 aaKnown RBP eCLIP22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 VCLP18206 1134 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 GPR15P49685 360 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 ATP4BP51164 291 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 KPNA1P52294 538 aaPredicted RBP22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 MAXP61244 160 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 USP46P62068 366 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 CEACAM7Q14002 265 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 OR6P1Q8NGX9 317 aa22.07■■□□□ 1.12
SMARCD2-201ENST00000225742 IGSF8Q969P0 613 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms