RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 WASH4PA8MWX3 477 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 ZNF487B1APH4 448 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 SIGLEC6O43699 453 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 PIAS2O75928 621 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 ZRANB2O95218 330 aaKnown RBP eCLIP18.21■□□□□ 0.515e-7■■□□□ 12.8
PFN1-201ENST00000225655 PAK4O96013 591 aaPredicted RBP18.21■□□□□ 0.51
PFN1-201ENST00000225655 JUPP14923 745 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 KDELR1P24390 212 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 CTNNA2P26232 953 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 GKP32189 559 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 SERPINB6P35237 376 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 RWDD2BP57060 319 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 YBEYP58557 167 aaPredicted RBP18.21■□□□□ 0.51
PFN1-201ENST00000225655 PARP15Q460N3 678 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 HS1BP3Q53T59 392 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 TMCO3Q6UWJ1 677 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 KYAT3Q6YP21 454 aaKnown RBP18.21■□□□□ 0.51
PFN1-201ENST00000225655 LEKR1Q6ZMV7 388 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 NT5DC3Q86UY8 548 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 CPNE8Q86YQ8 564 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 CCDC50Q8IVM0 306 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 RCOR2Q8IZ40 523 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 LZTR1Q8N653 840 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 ASB12Q8WXK4 309 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 BMFQ96LC9 184 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 GDAP1L1Q96MZ0 367 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 LENG8Q96PV6 779 aaPredicted RBP18.21■□□□□ 0.51
PFN1-201ENST00000225655 CSPG4P5Q96PW8 444 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 UCKL1Q9NWZ5 548 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 CWC15Q9P013 229 aaKnown RBP18.21■□□□□ 0.51
PFN1-201ENST00000225655 RAXQ9Y2V3 346 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 PCDHA3Q9Y5H8 950 aa18.21■□□□□ 0.51
PFN1-201ENST00000225655 MYLKQ15746 1914 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 POM121BA6NF01 834 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 RAD51BO15315 384 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 TMCC1O94876 653 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 FTCDO95954 541 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 UGT2B4P06133 528 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 ZFXP17010 805 aaPredicted RBP18.2■□□□□ 0.5
PFN1-201ENST00000225655 ABL2P42684 1182 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 SGCGQ13326 291 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 DPYSL3Q14195 570 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 INO80DQ53TQ3 878 aaPredicted RBP18.2■□□□□ 0.5
PFN1-201ENST00000225655 ATXN7L2Q5T6C5 722 aaPredicted RBP18.2■□□□□ 0.5
PFN1-201ENST00000225655 HES3Q5TGS1 186 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 PTAR1Q7Z6K3 402 aaPredicted RBP18.2■□□□□ 0.5
PFN1-201ENST00000225655 ZNF354CQ86Y25 554 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 UMODL1-AS1Q8N2C9 162 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 EXD1Q8NHP7 514 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 FAM71BQ8TC56 605 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 KLF6Q99612 283 aaPredicted RBP18.2■□□□□ 0.5
PFN1-201ENST00000225655 PYCARDQ9ULZ3 195 aa18.2■□□□□ 0.5
PFN1-201ENST00000225655 IGLON5A6NGN9 336 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 NEMP1O14524 444 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 AREL1O15033 823 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 SPINT1O43278 529 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 IGSF6O95976 241 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 GIMD1P0DJR0 217 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 ERCC2P18074 760 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 RABIFP47224 123 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 CLDN6P56747 220 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 SERINC3Q13530 473 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 DPYSQ14117 519 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 FZD2Q14332 565 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 ATP13A4Q4VNC1 1196 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 ANKRD20A8PQ5CZ79 823 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 GDPD4Q6W3E5 623 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 CACTIN-AS1Q8N1I8 211 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 RAPGEF5Q92565 580 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 NXPE2Q96DL1 559 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 HMCESQ96FZ2 354 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 KLHL32Q96NJ5 620 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 KLC2Q9H0B6 622 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 DNAJC28Q9NX36 388 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 GGT7Q9UJ14 662 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 ITM2BQ9Y287 266 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 MFHAS1Q9Y4C4 1052 aa18.19■□□□□ 0.5
PFN1-201ENST00000225655 SPTY2D1-AS1A0A0U1RR47 76 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 NEMP2A6NFY4 417 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RASA4BC9J798 803 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 FPGTO14772 594 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 FFAR2O15552 330 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RASA4O43374 803 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 ARSEP51690 589 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 NDST2P52849 883 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 COPS2P61201 443 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RHOAP61586 193 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 E2F1Q01094 437 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RAD51Q06609 339 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 TARDBPQ13148 414 aaKnown RBP eCLIP18.18■□□□□ 0.5
PFN1-201ENST00000225655 TFDP2Q14188 446 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RPS6KA1Q15418 735 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RFX6Q8HWS3 928 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 REXO1L1PQ8IX06 675 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 DENND6BQ8NEG7 585 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 RNF25Q96BH1 459 aaPredicted RBP18.18■□□□□ 0.5
PFN1-201ENST00000225655 SCUBE2Q9NQ36 999 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 NLGN3Q9NZ94 848 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 DKK3Q9UBP4 350 aa18.18■□□□□ 0.5
PFN1-201ENST00000225655 CACNA1GO43497 2377 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms