RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 ARRDC4Q8NCT1 418 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 SHCBP1Q8NEM2 672 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 SLCO4A1Q96BD0 722 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 GPR78Q96P69 363 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 SLC2A13Q96QE2 648 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 MROH8Q9H579 483 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 SOX17Q9H6I2 414 aaPredicted RBP17.3■□□□□ 0.36
H2AFV-201ENST00000222690 CDC14AQ9UNH5 594 aa17.3■□□□□ 0.36
H2AFV-201ENST00000222690 MEIS3P2A8K0S8 358 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 NPHS1O60500 1241 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 COL6A2P12110 1019 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 LRP8Q14114 963 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 PIM3Q86V86 326 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 NT5C3BQ969T7 300 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 ZNF597Q96LX8 424 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 OLAHQ9NV23 265 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 OR51F1A6NGY5 319 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 TARM1B6A8C7 271 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 H3BNH8 94 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 INPP4BO15327 924 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 ATP6V1B2P21281 511 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 NEDD8Q15843 81 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 HMBOX1Q6NT76 420 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 FIBCD1Q8N539 461 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 HMGCLL1Q8TB92 370 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 TUBGCP3Q96CW5 907 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 GLOD4Q9HC38 313 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 BTRCQ9Y297 605 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 FNDC3AQ9Y2H6 1198 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 TCAF1Q9Y4C2 921 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 SSC5DA1L4H1 1573 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 DDNO94850 711 aaPredicted RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 LTA4HP09960 611 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 DARSP14868 501 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 BDNFP23560 247 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 YAP1P46937 504 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 GPR107Q5VW38 600 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 TFAP2DQ7Z6R9 452 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 DNAJB14Q8TBM8 379 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 PAIP1Q9H074 479 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 GDAP2Q9NXN4 497 aa17.29■□□□□ 0.36
H2AFV-201ENST00000222690 UTP6Q9NYH9 597 aaKnown RBP17.29■□□□□ 0.36
H2AFV-201ENST00000222690 A0A0J9YYE9 177 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 CASTOR2A6NHX0 329 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 TMX2-CTNND1H3BSU7 103 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 PPP6CO00743 305 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 SIX3O95343 332 aaPredicted RBP17.28■□□□□ 0.36
H2AFV-201ENST00000222690 IL10P22301 178 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 CES1P23141 567 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 ARNTP27540 789 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 OR2T34Q8NGX1 318 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 OR2T3Q8NH03 318 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 ANKRD49Q8WVL7 239 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 IPPQ9Y573 584 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.28■□□□□ 0.36
H2AFV-201ENST00000222690 PLCL1Q15111 1095 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 KCTD21Q4G0X4 260 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 ERI1Q8IV48 349 aaKnown RBP17.28■□□□□ 0.36
H2AFV-201ENST00000222690 SEPHS2Q99611 448 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 ADAMTS10Q9H324 1103 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 MID1IP1Q9NPA3 183 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 NDFIP2Q9NV92 336 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 CDK9P50750 372 aaKnown RBP17.28■□□□□ 0.36
H2AFV-201ENST00000222690 PRAMEF19Q5SWL8 479 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 NTAN1Q96AB6 310 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 FBXL20Q96IG2 436 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 SLC9A7Q96T83 725 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 TCF12Q99081 682 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 SLC2A11Q9BYW1 496 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 ZNF408Q9H9D4 720 aa17.28■□□□□ 0.36
H2AFV-201ENST00000222690 A0A087X1B8 175 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 DHRS12A0PJE2 317 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 LRRC14BA6NHZ5 514 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 AP3B1O00203 1094 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 HLA-DQB2P05538 268 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 MTHFD1P11586 935 aaKnown RBP17.27■□□□□ 0.36
H2AFV-201ENST00000222690 SMPD1P17405 629 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 FRG1Q14331 258 aaKnown RBP17.27■□□□□ 0.36
H2AFV-201ENST00000222690 CYP51A1Q16850 503 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 TRIM74Q86UV6 250 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 TRIM73Q86UV7 250 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 C3orf30Q96M34 536 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 BRD8Q9H0E9 1235 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 NT5MQ9NPB1 228 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 SMOXQ9NWM0 555 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 BAIAP3O94812 1187 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 F9P00740 461 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 NCK1P16333 377 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 PSMA4P25789 261 aaKnown RBP17.27■□□□□ 0.36
H2AFV-201ENST00000222690 AFF1P51825 1210 aaKnown RBP17.27■□□□□ 0.36
H2AFV-201ENST00000222690 GEMP55040 296 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 PLIN5Q00G26 463 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 OTUD3Q5T2D3 398 aaPredicted RBP17.27■□□□□ 0.36
H2AFV-201ENST00000222690 C19orf60Q96EN9 201 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 KLHL5Q96PQ7 755 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 SLC39A8Q9C0K1 460 aa17.27■□□□□ 0.36
H2AFV-201ENST00000222690 C8BP07358 591 aa17.27■□□□□ 0.35
H2AFV-201ENST00000222690 MMP3P08254 477 aa17.27■□□□□ 0.35
H2AFV-201ENST00000222690 GFAPP14136 432 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms