RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 TK2O00142 265 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 XRCC1P18887 633 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CYP3A5P20815 502 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SSTR1P30872 391 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 L1CAMP32004 1257 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 GABRB2P47870 512 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 OR3A3P47888 321 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SELPLGQ14242 412 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 DSC3Q14574 896 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 FAM109AQ8N4B1 249 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 GRPEL2Q8TAA5 225 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 PDCD6IPQ8WUM4 868 aaKnown RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 HERVK_113Q902F9 699 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 MCRS1Q96EZ8 462 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 TUBA1CQ9BQE3 449 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 C20orf27Q9GZN8 174 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CXCL16Q9H2A7 254 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 SAE1Q9UBE0 346 aaPredicted RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 MORF4L1Q9UBU8 362 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 PRPF19Q9UMS4 504 aaKnown RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
GABPB1-201ENST00000220429 RALGAPA2Q2PPJ7 1873 aa13.72□□□□□ -0.21
GABPB1-201ENST00000220429 CLUHO75153 1309 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DNAH12Q6ZR08 3092 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 GLTPD2A6NH11 291 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 SHOXO15266 292 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 HDAC3O15379 428 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 MMP3P08254 477 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 RPL17P18621 184 aaKnown RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 POU6F2P78424 691 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 MRPS15P82914 257 aaKnown RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 VAC14Q08AM6 782 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 GNA13Q14344 377 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 KYAT1Q16773 422 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 C16orf46Q6P387 395 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 CCBE1Q6UXH8 406 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 PLPP6Q8IY26 295 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 FBXL6Q8N531 539 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 SLC35B2Q8TB61 432 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 UBA3Q8TBC4 463 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 HEXIM2Q96MH2 286 aaKnown RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 IL12RB2Q99665 862 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 ACSS3Q9H6R3 686 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 GPN2Q9H9Y4 310 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 IL20Q9NYY1 176 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 SLC45A1Q9Y2W3 748 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 COPEO14579 308 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DEAF1O75398 565 aaPredicted RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 ALDH1A2O94788 518 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 UGT2B4P06133 528 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 ITGAVP06756 1048 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 KRT7P08729 469 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 COX4I1P13073 169 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 KDELR1P24390 212 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 CBX5P45973 191 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 LEPRP48357 1165 aaKnown RBP13.71□□□□□ -0.21
GABPB1-201ENST00000220429 NDST1P52848 882 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DYNLT1P63172 113 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 INCA1Q0VD86 236 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 GPS1Q13098 491 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 NEDD8Q15843 81 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 TAZQ16635 292 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DUSP28Q4G0W2 176 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 SH2D5Q6ZV89 423 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 GPR142Q7Z601 462 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 RAB2BQ8WUD1 216 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 DEPDC7Q96QD5 511 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 TMEM246Q9BRR3 403 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 RTKNQ9BST9 563 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 ACAT2Q9BWD1 397 aa13.71□□□□□ -0.21
GABPB1-201ENST00000220429 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
GABPB1-201ENST00000220429 AKAP10O43572 662 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 ACSL4O60488 711 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SNNO75324 88 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 BANF1O75531 89 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CCNKO75909 580 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 HMGCRP04035 888 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 MX2P20592 715 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 RBP5P82980 135 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 GRB14Q14449 540 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 TAF5Q15542 800 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 MAPK11Q15759 364 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 HADHQ16836 314 aaKnown RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 NUDCD3Q8IVD9 361 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 AFAP1L2Q8N4X5 818 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 JPH3Q8WXH2 748 aaPredicted RBP13.7□□□□□ -0.22
GABPB1-201ENST00000220429 TFAP2CQ92754 450 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 SLC39A13Q96H72 371 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 KLHL32Q96NJ5 620 aa13.7□□□□□ -0.22
GABPB1-201ENST00000220429 CCSER2Q9H7U1 834 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms