RNA–Protein interactions for RNA: ENST00000219548.8

STUB1-201, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STUB1, Length 1,472 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-201ENST00000219548 CTPS1P17812 591 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 EPHB1P54762 984 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 POLR2LP62875 67 aaKnown RBP26.81■■□□□ 1.88
STUB1-201ENST00000219548 RPL6Q02878 288 aaKnown RBP26.81■■□□□ 1.88
STUB1-201ENST00000219548 CKAP4Q07065 602 aaKnown RBP26.81■■□□□ 1.88
STUB1-201ENST00000219548 OLIG2Q13516 323 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 SPOCK2Q92563 424 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 RAB7BQ96AH8 199 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 KRT12Q99456 494 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 ETNK1Q9HBU6 452 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 RAB6BQ9NRW1 208 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 PCYOX1Q9UHG3 505 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 PHTF1Q9UMS5 762 aa26.81■■□□□ 1.88
STUB1-201ENST00000219548 AAR2Q9Y312 384 aaKnown RBP26.81■■□□□ 1.88
STUB1-201ENST00000219548 A0A1W2PQ67 120 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 AREL1O15033 823 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 ALPIP09923 528 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 ZNF572Q7Z3I7 529 aaPredicted RBP26.8■■□□□ 1.88
STUB1-201ENST00000219548 FEM1CQ96JP0 617 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 FICDQ9BVA6 458 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 FSD1LQ9BXM9 530 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 C6orf106Q9H6K1 298 aaPredicted RBP26.8■■□□□ 1.88
STUB1-201ENST00000219548 NEU2Q9Y3R4 380 aa26.8■■□□□ 1.88
STUB1-201ENST00000219548 TNRC6BQ9UPQ9 1833 aaKnown RBP26.79■■□□□ 1.88
STUB1-201ENST00000219548 MYLKQ15746 1914 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3DA0A087WVF3 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3IA0A087WXS9 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3EA0A087X179 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3KA0A087X1G2 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3FA6NER0 549 aaPredicted RBP26.79■■□□□ 1.88
STUB1-201ENST00000219548 A8MX80 341 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3LB9A6J9 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 GAS8O95995 478 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3HP0C7X1 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 CNR2P34972 360 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 PTGIRP43119 386 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 CHRNA4P43681 627 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 FAM193AP78312 1265 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 SPARCL1Q14515 664 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 PPP1R7Q15435 360 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3GQ6DHY5 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3CQ6IPX1 549 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 SLC36A4Q6YBV0 504 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 CEP68Q76N32 757 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 KLHDC8BQ8IXV7 354 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 TBC1D3Q8IZP1 549 aaPredicted RBP26.79■■□□□ 1.88
STUB1-201ENST00000219548 OR2T34Q8NGX1 318 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 RMDN1Q96DB5 314 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 APOL2Q9BQE5 337 aa26.79■■□□□ 1.88
STUB1-201ENST00000219548 FEZ2Q9UHY8 353 aaPredicted RBP26.79■■□□□ 1.88
STUB1-201ENST00000219548 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 LRRC72A6NJI9 287 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 NEMP1O14524 444 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 RIOK3O14730 519 aaKnown RBP26.78■■□□□ 1.88
STUB1-201ENST00000219548 AP1G1O43747 822 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 PCDH8O95206 1070 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 AGTP01019 485 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 FDFT1P37268 417 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 TERF1P54274 439 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 PPP2CBP62714 309 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 PPP2CAP67775 309 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 GPS1Q13098 491 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 QPCTQ16769 361 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 ERAP2Q6P179 960 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 TMEFF1Q8IYR6 380 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 SLC25A41Q8N5S1 370 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 PDCD7Q8N8D1 485 aaKnown RBP26.78■■□□□ 1.88
STUB1-201ENST00000219548 SLCO2A1Q92959 643 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 PPP1R2P1Q96PQ5 205 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 ADGRE3Q9BY15 652 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 B4GALT6Q9UBX8 382 aa26.78■■□□□ 1.88
STUB1-201ENST00000219548 ARIH1Q9Y4X5 557 aaPredicted RBP26.78■■□□□ 1.88
STUB1-201ENST00000219548 A0A0J9YYE9 177 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 LOC285095A0A1B0GVY8 99 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 USP12O75317 370 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 NDST3O95803 873 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 TRBC1P01850 177 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 ATXN1LP0C7T5 689 aaKnown RBP26.77■■□□□ 1.88
STUB1-201ENST00000219548 MMP12P39900 470 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 GRIA4P48058 902 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 RPL26P61254 145 aaKnown RBP26.77■■□□□ 1.88
STUB1-201ENST00000219548 BASP1P80723 227 aaKnown RBP26.77■■□□□ 1.88
STUB1-201ENST00000219548 DR1Q01658 176 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 TUBB2AQ13885 445 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 KCTD11Q693B1 232 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 WRAP53Q9BUR4 548 aaKnown RBP26.77■■□□□ 1.88
STUB1-201ENST00000219548 TUBB2BQ9BVA1 445 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 PREBQ9HCU5 417 aa26.77■■□□□ 1.88
STUB1-201ENST00000219548 RPL26L1Q9UNX3 145 aaKnown RBP26.77■■□□□ 1.88
STUB1-201ENST00000219548 PLXNA2O75051 1894 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 A0A0U1RQS6 177 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 GOLGA6CA6NDK9 693 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 GOLGA6BA6NDN3 693 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 NPIPB15A6NHN6 443 aaPredicted RBP26.76■■□□□ 1.87
STUB1-201ENST00000219548 ANKRD66B4E2M5 251 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 GOLGA6DP0CG33 693 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 ADRA1AP35348 466 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 TNNT3P45378 269 aaPredicted RBP26.76■■□□□ 1.87
STUB1-201ENST00000219548 SUOXP51687 545 aa26.76■■□□□ 1.87
STUB1-201ENST00000219548 PTPN5P54829 565 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms