RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ADHFE1Q8IWW8 467 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TBC1D30Q9Y2I9 924 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PTPRJQ12913 1337 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TSPAN19P0C672 248 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 RPL7AP62424 266 aaKnown RBP19.04■□□□□ 0.64
SMPD3-201ENST00000219334 BMT2Q1RMZ1 405 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PARP15Q460N3 678 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 HYIQ5T013 277 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PACS1Q6VY07 963 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 CDYL2Q8N8U2 506 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 SEZ6LQ9BYH1 1024 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 H3BNH8 94 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 MSI1O43347 362 aaKnown RBP19.04■□□□□ 0.64
SMPD3-201ENST00000219334 LGR5O75473 907 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 VIPP01282 170 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TAPT1Q6NXT6 567 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 AADACL2Q6P093 401 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 C11orf88Q6PI97 169 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 TSHZ1Q6ZSZ6 1077 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 PGM2Q96G03 612 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 C9orf16Q9BUW7 83 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 HDHD2Q9H0R4 259 aa19.04■□□□□ 0.64
SMPD3-201ENST00000219334 hCG_1818297A0A087WSY0 165 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 PTPN2P17706 415 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 IDSP22304 550 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CXCR3P49682 368 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ATP12AP54707 1039 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 TBX2Q13207 712 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 INO80DQ53TQ3 878 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 SPDYCQ5MJ68 293 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 C17orf64Q86WR6 236 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ZSCAN18Q8TBC5 510 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ASZ1Q8WWH4 475 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 SYN3O14994 580 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 UGT2B4P06133 528 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ZCCHC18P0CG32 403 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 RPL38P63173 70 aaKnown RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CHSY3Q70JA7 882 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CCDC185Q8N715 623 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 OR14C36Q8NHC7 312 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ARNTL2Q8WYA1 636 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CENPIQ92674 756 aaPredicted RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 LINGO1Q96FE5 620 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 LHX5Q9H2C1 402 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 GDF3Q9NR23 364 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 KCNK4Q9NYG8 393 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 SUCOQ9UBS9 1254 aaKnown RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 RPS6KA6Q9UK32 745 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ERVW-1Q9UQF0 538 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 KLRC4O43908 158 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CLPTM1O96005 669 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 HK2P52789 917 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 RAB14P61106 215 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 LSM12Q3MHD2 195 aaKnown RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 MCRS1Q96EZ8 462 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 IQGAP1P46940 1657 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ITGA1P56199 1179 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 RALGDSQ12967 914 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CPSF6Q16630 551 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 INTS6LQ5JSJ4 861 aaKnown RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 CLP1Q92989 425 aaKnown RBP19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ACAT2Q9BWD1 397 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 ANAPC2Q9UJX6 822 aa19.03■□□□□ 0.64
SMPD3-201ENST00000219334 FAM58BPP0C7Q3 252 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 RPL4P36578 427 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ST13P50502 369 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 CORO7P57737 925 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 COX10Q12887 443 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF618Q5T7W0 954 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 EXOC3L1Q86VI1 746 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ST13P5Q8NFI4 369 aaPredicted RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF398Q8TD17 642 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 EBNA1BP2Q99848 306 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ANKZF1Q9H8Y5 726 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 SLC9A8Q9Y2E8 581 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 BAZ2BQ9UIF8 2168 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 TMEM191CA6NGB0 347 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ADRA1BP35368 520 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 PIWIL4Q7Z3Z4 852 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 C12orf56Q8IXR9 622 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ZNF276Q8N554 614 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 NLGN2Q8NFZ4 835 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 OR6Y1Q8NGX8 325 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 FBXO30Q8TB52 745 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 KCTD4Q8WVF5 259 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 LEF1Q9UJU2 399 aaPredicted RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 NDRG2Q9UN36 371 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 SMIM11AP58511 58 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 PIWIL2Q8TC59 973 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 NELL1Q92832 810 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 LMAN2LQ9H0V9 348 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 DUS2Q9NX74 493 aaKnown RBP19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ELOVL2Q9NXB9 296 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 ARMCX1Q9P291 453 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 VPS4AQ9UN37 437 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 CHKBQ9Y259 395 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 NCANO14594 1321 aa19.02■□□□□ 0.64
SMPD3-201ENST00000219334 FAM153BP0C7A2 387 aa19.02■□□□□ 0.63
SMPD3-201ENST00000219334 RANBP1P43487 201 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms