RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CDH9Q9ULB4 789 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 DMTF1Q9Y222 760 aa17.39■□□□□ 0.37
USB1-201ENST00000219281 HEATR9A2RTY3 570 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PRORSD1PA6NEY8 169 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 TRIM24O15164 1050 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 GPC4O75487 556 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PSMD8P48556 350 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PFKPQ01813 784 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 MAPRE2Q15555 327 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PCSK7Q16549 785 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 LAYNQ6UX15 382 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 CYP2R1Q6VVX0 501 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PTCD2Q8WV60 388 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 MYLPFQ96A32 169 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 FAR2Q96K12 515 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 MRGPRX2Q96LB1 330 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 KATNAL1Q9BW62 490 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 EML4Q9HC35 981 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 MRM3Q9HC36 420 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 MRPL40Q9NQ50 206 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 RNF11Q9Y3C5 154 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 IPO13O94829 963 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 BDNFP23560 247 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 RHDQ02161 417 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 CRHR2Q13324 411 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 PABPC1LQ4VXU2 614 aaKnown RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 KIAA0930Q6ICG6 404 aaPredicted RBP17.38■□□□□ 0.37
USB1-201ENST00000219281 AFAP1L2Q8N4X5 818 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 SLCO4A1Q96BD0 722 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 GAD1Q99259 594 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 SNX13Q9Y5W8 968 aa17.38■□□□□ 0.37
USB1-201ENST00000219281 MT-CO1P00395 513 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 SNRPB2P08579 225 aaKnown RBP17.37■□□□□ 0.37
USB1-201ENST00000219281 NR1H2P55055 460 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 CREB5Q02930 508 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 AGAP9Q5VTM2 703 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 HERC6Q8IVU3 1022 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 CCDC117Q8IWD4 279 aaPredicted RBP17.37■□□□□ 0.37
USB1-201ENST00000219281 CHERPQ8IWX8 916 aaKnown RBP17.37■□□□□ 0.37
USB1-201ENST00000219281 SOCS4Q8WXH5 440 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 ZNF597Q96LX8 424 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 SPAG4Q9NPE6 437 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 MIOSQ9NXC5 875 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 SARDHQ9UL12 918 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 H3BSA7 217 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 LTA4HP09960 611 aaKnown RBP17.37■□□□□ 0.37
USB1-201ENST00000219281 CCDC166P0CW27 439 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 AKR1A1P14550 325 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 IKBKEQ14164 716 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 PSMD5Q16401 504 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 MTX3Q5HYI7 312 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 RANBP10Q6VN20 620 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 IRGQQ8WZA9 623 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 TOP1MTQ969P6 601 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 ZIC5Q96T25 663 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 CSNK1G1Q9HCP0 422 aa17.37■□□□□ 0.37
USB1-201ENST00000219281 ARHGAP10A1A4S6 786 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 ARHGEF37A1IGU5 675 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 MRASO14807 208 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 DUSP11O75319 330 aaKnown RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 PAGE1O75459 146 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 NELFEP18615 380 aaKnown RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 TSPAN8P19075 237 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 TRAP1Q12931 704 aaKnown RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 TMEM259Q4ZIN3 620 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 GNASQ5JWF2 1037 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CLEC6AQ6EIG7 209 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 KLC3Q6P597 504 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 OR9I1Q8NGQ6 314 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 LPPQ93052 612 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CCDC126Q96EE4 140 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 SLC29A1Q99808 456 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 PAAF1Q9BRP4 392 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 ZFYVE28Q9HCC9 887 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 SLC38A7Q9NVC3 462 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 PADI4Q9UM07 663 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 BPTFQ12830 3046 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CASTOR2A6NHX0 329 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 FAM155AB1AL88 458 aaPredicted RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 TMCC1O94876 653 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 THP07101 528 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 SLC10A3P09131 477 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 YWHAQP27348 245 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 INHBCP55103 352 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CXCL17Q6UXB2 119 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 MYO1HQ8N1T3 1032 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 TSPAN14Q8NG11 270 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 SCAMP5Q8TAC9 235 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 ANKRD49Q8WVL7 239 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CIB1Q99828 191 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 ARHGAP39Q9C0H5 1083 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 NOL11Q9H8H0 719 aaKnown RBP17.36■□□□□ 0.37
USB1-201ENST00000219281 HSFX1Q9UBD0 423 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CD300AQ9UGN4 299 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 SFMBT1Q9UHJ3 866 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 CROTQ9UKG9 612 aa17.36■□□□□ 0.37
USB1-201ENST00000219281 ATP6AP2A0A1C7CYW4 349 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 TCRBV3S1A0A5B6 114 aa17.35■□□□□ 0.37
USB1-201ENST00000219281 PDLIM1O00151 329 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms