RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 NDST3O95803 873 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 ZSCAN5DPP0CG00 497 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 CTAGE8P0CG41 777 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 HLA-DPA1P20036 260 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 GPS1Q13098 491 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TRIP13Q15645 432 aaPredicted RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 NAPEPLDQ6IQ20 393 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 KDELC1Q6UW63 502 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 CEP68Q76N32 757 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 LINC00523Q86TU6 105 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 CTAGE6Q86UF2 777 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 CTAGE4Q8IX94 777 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 ZBTB44Q8NCP5 570 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 SRPK1Q96SB4 655 aaKnown RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 PCED1AQ9H1Q7 454 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 CD93Q9NPY3 652 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 ASIC3Q9UHC3 531 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3DA0A087WVF3 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3IA0A087WXS9 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3EA0A087X179 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3KA0A087X1G2 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3FA6NER0 549 aaPredicted RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 FAM47DPA6NHR8 397 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3LB9A6J9 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3HP0C7X1 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TIMP2P16035 220 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 VPS41P49754 854 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 FAM193AP78312 1265 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 RPL6Q02878 288 aaKnown RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 SEMA5AQ13591 1074 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 FAXCQ5TGI0 409 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3GQ6DHY5 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3CQ6IPX1 549 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 NEK5Q6P3R8 708 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 KDELC2Q7Z4H8 507 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TBC1D3Q8IZP1 549 aaPredicted RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TAB3Q8N5C8 712 aaPredicted RBP20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 GLIS1Q8NBF1 620 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 MRGPRX2Q96LB1 330 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 ETNK1Q9HBU6 452 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 PCDH12Q9NPG4 1184 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 HCN4Q9Y3Q4 1203 aa20.31■□□□□ 0.84
RHBDD3-201ENST00000216085 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 ANKRD66B4E2M5 251 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PCDH8O95206 1070 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 AP2A1O95782 977 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 FGF1P05230 155 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PDHA1P08559 390 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 ACSL1P33121 698 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 ABL2P42684 1182 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PTPN5P54829 565 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PTK6Q13882 451 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PRUNE1Q86TP1 453 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 ZSWIM9Q86XI8 627 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 PIH1D2Q8WWB5 315 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 TBL1YQ9BQ87 522 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 MLPHQ9BV36 600 aaPredicted RBP20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 FICDQ9BVA6 458 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 GPR174Q9BXC1 333 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 INVSQ9Y283 1065 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 FADS3Q9Y5Q0 445 aa20.3■□□□□ 0.84
RHBDD3-201ENST00000216085 A0A0J9YYE9 177 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 NDC80O14777 642 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 TRBC1P01850 177 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 APRTP07741 180 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 GALNT3Q14435 633 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 IHHQ14623 411 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 ELF2Q15723 593 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 KIAA1161Q6NSJ0 714 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 LPCAT2Q7L5N7 544 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 JAMLQ86YT9 394 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 KLHDC8BQ8IXV7 354 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 FAM160A2Q8N612 972 aaPredicted RBP20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 PDCD7Q8N8D1 485 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 CADM4Q8NFZ8 388 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 CXorf40AQ8TE69 158 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 FOXJ1Q92949 421 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 SCRN2Q96FV2 425 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 TRIB3Q96RU7 358 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 EIF2B3Q9NR50 452 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 LOC285095A0A1B0GVY8 99 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 PRR23AA6NEV1 266 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 FAM187AA6NFU0 413 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 H0Y858 1186 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 RIOK3O14730 519 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 AREL1O15033 823 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 ADCY8P40145 1251 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 SARNPP82979 210 aaKnown RBP20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 ARHGEF7Q14155 803 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 SLC1A5Q15758 541 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 LRRC73Q5JTD7 316 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 GORASP1Q9BQQ3 440 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 PPIL1Q9Y3C6 166 aa20.29■□□□□ 0.84
RHBDD3-201ENST00000216085 PLXND1Q9Y4D7 1925 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 CAPN8A6NHC0 703 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 RHOBTB1O94844 696 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 MMP12P39900 470 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 PTGIRP43119 386 aa20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 RPS21P63220 83 aaKnown RBP20.28■□□□□ 0.84
RHBDD3-201ENST00000216085 CDK16Q00536 496 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms