RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 BCKDHBP21953 392 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 PRKCHP24723 683 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CORO1AP31146 461 aaKnown RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 SERPINB9P50453 376 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ATP1A2P50993 1020 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 IRX4P78413 519 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CDH17Q12864 832 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 FRG1Q14331 258 aaKnown RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 RFTN1Q14699 578 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 TMED2Q15363 201 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SPANXN3Q5MJ09 141 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 HP1BP3Q5SSJ5 553 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 ADGRF1Q5T601 910 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TXNDC8Q6A555 127 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CASC4Q6P4E1 433 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ADGRD1Q6QNK2 874 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CAPN12Q6ZSI9 719 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ZNF534Q76KX8 674 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SETD3Q86TU7 594 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 DNAAF3Q8N9W5 541 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 IGSF8Q969P0 613 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TTC17Q96AE7 1141 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SMC6Q96SB8 1091 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 IL22Q9GZX6 179 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CASS4Q9NQ75 786 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ZNF180Q9UJW8 692 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CELSR3Q9NYQ7 3312 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 TRAV19A0A0A6YYK7 116 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 A0A1B0GVM2 712 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TCAF2A6NFQ2 919 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 OLFM2O95897 454 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 POLBP06746 335 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CNTFP26441 200 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 LMAN2Q12907 356 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ZNF177Q13360 481 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 KCTD11Q693B1 232 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 NADSYN1Q6IA69 706 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TFAP2DQ7Z6R9 452 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SLC26A11Q86WA9 606 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 RASSF3Q86WH2 238 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 LRRC6Q86X45 466 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 DENND1CQ8IV53 801 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TP53INP2Q8IXH6 220 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 PTCD2Q8WV60 388 aaKnown RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 PIGKQ92643 395 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 MTBPQ96DY7 904 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 HMCESQ96FZ2 354 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 PAFAH2Q99487 392 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 DHRS4Q9BTZ2 278 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 CEP41Q9BYV8 373 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SLC25A51Q9H1U9 297 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SLC32A1Q9H598 525 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 TRPC7Q9HCX4 862 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 SSU72Q9NP77 194 aaKnown RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 EURLQ9NYK6 297 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 EVLQ9UI08 416 aaPredicted RBP12.37□□□□□ -0.43
SNU13-201ENST00000215956 MSRB2Q9Y3D2 182 aa12.37□□□□□ -0.43
SNU13-201ENST00000215956 MYO18AQ92614 2054 aaKnown RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 ILVBLA1L0T0 632 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 BANF1O75531 89 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 KRT38O76015 456 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 HDCP19113 662 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 CD68P34810 354 aaPredicted RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 SLC18A1P54219 525 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 OXCT1P55809 520 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 SLC7A9P82251 487 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 SERINC3Q13530 473 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 ALFQ53S48 1182 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 TRIM61Q5EBN2 209 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 SYCP2LQ5T4T6 812 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 ARTNQ5T4W7 220 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 UBAP2Q5T6F2 1119 aaKnown RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 ANO7Q6IWH7 933 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 EXOC3L1Q86VI1 746 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 NETO2Q8NC67 525 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 GABPB2Q8TAK5 448 aaPredicted RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 OSCP1Q8WVF1 389 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 SLC44A1Q8WWI5 657 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 ATP2A3Q93084 1043 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 WDR83Q9BRX9 315 aaKnown RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 FSD1LQ9BXM9 530 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 INTS9Q9NV88 658 aaKnown RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 DUS2Q9NX74 493 aaKnown RBP12.36□□□□□ -0.43
SNU13-201ENST00000215956 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 IGSF10Q6WRI0 2623 aa12.36□□□□□ -0.43
SNU13-201ENST00000215956 SETXQ7Z333 2677 aaKnown RBP12.35□□□□□ -0.43
SNU13-201ENST00000215956 TAF4O00268 1085 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 AVILO75366 819 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 CNTN5O94779 1100 aa12.35□□□□□ -0.43
SNU13-201ENST00000215956 RHOCP08134 193 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms