RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TBL1YQ9BQ87 522 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 FSD1LQ9BXM9 530 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 VPS45Q9NRW7 570 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 C2CD4DB7Z1M9 353 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 EDF1O60869 148 aaKnown RBP22.22■■□□□ 1.15
HOXC8-201ENST00000040584 ADRA1AP35348 466 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 ECT2LQ008S8 904 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 NAIF1Q69YI7 327 aaPredicted RBP22.22■■□□□ 1.15
HOXC8-201ENST00000040584 CGB2Q6NT52 195 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 LINC00523Q86TU6 105 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 SORCS1Q8WY21 1168 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 SCUBE2Q9NQ36 999 aa22.22■■□□□ 1.15
HOXC8-201ENST00000040584 IQANK1A0A1B0GTG1 560 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 INSIG1O15503 277 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 POLR2EP19388 210 aaKnown RBP22.21■■□□□ 1.15
HOXC8-201ENST00000040584 MGAT1P26572 445 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 CRADDP78560 199 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 ATXN7L2Q5T6C5 722 aaPredicted RBP22.21■■□□□ 1.15
HOXC8-201ENST00000040584 GPR153Q6NV75 609 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 CAPN12Q6ZSI9 719 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 TTC17Q96AE7 1141 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 RAB3IPQ96QF0 476 aaPredicted RBP22.21■■□□□ 1.15
HOXC8-201ENST00000040584 TM6SF2Q9BZW4 377 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 CD248Q9HCU0 757 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 DEC1Q9P2X7 70 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 SLC25A13Q9UJS0 675 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 HS3ST2Q9Y278 367 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 SLC27A6Q9Y2P4 619 aa22.21■■□□□ 1.15
HOXC8-201ENST00000040584 SDR42E2A6NKP2 422 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 VGLL3A8MV65 326 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SERPINF2P08697 491 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SRCP12931 536 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 GJA4P35212 333 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 RPA3P35244 121 aaPredicted RBP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SULT2A1Q06520 285 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SF3A3Q12874 501 aaKnown RBP eCLIP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 DGKKQ5KSL6 1271 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 CYB5D2Q8WUJ1 264 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 HLA-CQ95604 372 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 NUDCD1Q96RS6 583 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 EBNA1BP2Q99848 306 aaKnown RBP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 CIPCQ9C0C6 399 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 VPS11Q9H270 941 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 YY1AP1Q9H869 796 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SLCO3A1Q9UIG8 710 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 CXorf51AA0A1B0GTR3 108 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 ARNTLO00327 626 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 ZNF821O75541 412 aaPredicted RBP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 TPH1P17752 444 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 KRT4P19013 534 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 SSTR1P30872 391 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 KDSRQ06136 332 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 NSUN2Q08J23 767 aaKnown RBP eCLIP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 GRAMD4Q6IC98 578 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 DENND5AQ6IQ26 1287 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 RANBP10Q6VN20 620 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 ASRGL1Q7L266 308 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 PAFAH2Q99487 392 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 TNKS2Q9H2K2 1166 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 BRD9Q9H8M2 597 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 PLAC1Q9HBJ0 212 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 ZC3H7BQ9UGR2 993 aaKnown RBP22.2■■□□□ 1.14
HOXC8-201ENST00000040584 MAD1L1Q9Y6D9 718 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 IKBKGQ9Y6K9 419 aa22.2■■□□□ 1.14
HOXC8-201ENST00000040584 UNC5CO95185 931 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 ALADP13716 330 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 CHRNA4P43681 627 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 CDH17Q12864 832 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 AAK1Q2M2I8 961 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 CERCAMQ5T4B2 595 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 C4orf33Q8N1A6 199 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 SLC25A41Q8N5S1 370 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 LRRC37BQ96QE4 947 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 TRIM56Q9BRZ2 755 aaKnown RBP22.19■■□□□ 1.14
HOXC8-201ENST00000040584 SYBUQ9NX95 663 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 BAIAP2L1Q9UHR4 511 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 ERVW-1Q9UQF0 538 aa22.19■■□□□ 1.14
HOXC8-201ENST00000040584 COL4A3Q01955 1670 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 AP3B1O00203 1094 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 OPRD1P41143 372 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 RASSF2P50749 326 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 DNAJC3Q13217 504 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 ITPRIPL2Q3MIP1 535 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 ACCSLQ4AC99 568 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 CASC4Q6P4E1 433 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 METTL3Q86U44 580 aaKnown RBP22.18■■□□□ 1.14
HOXC8-201ENST00000040584 OR6K2Q8NGY2 324 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 WFIKKN2Q8TEU8 576 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 NXPE3Q969Y0 559 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 CHFRQ96EP1 664 aa22.18■■□□□ 1.14
HOXC8-201ENST00000040584 A0A1W2PPM1 405 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 PRRT4C9JH25 899 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 HNRNPCL1O60812 293 aaKnown RBP22.17■■□□□ 1.14
HOXC8-201ENST00000040584 GSTA2P09210 222 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 CES1P23141 567 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 SLC14A2Q15849 920 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 NCEH1Q6PIU2 408 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 LVRNQ6Q4G3 990 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 FAM47EQ6ZV65 393 aa22.17■■□□□ 1.14
HOXC8-201ENST00000040584 SFTPA1Q8IWL2 248 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms