RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 SLC41A1Q8IVJ1 513 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 C10orf67Q8IYJ2 551 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 TMEM151AQ8N4L1 468 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 PPP1R14CQ8TAE6 165 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 ACDQ96AP0 544 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 TSPAN17Q96FV3 270 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 TSNARE1Q96NA8 513 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 OMDQ99983 421 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 MYLK2Q9H1R3 596 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 TLR9Q9NR96 1032 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 PCDH10Q9P2E7 1040 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 VPS51Q9UID3 782 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
RTFDC1-201ENST00000023939 CCDC195A0A1B0GUA6 201 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 A0A1W2PRU2 124 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 E2F8A0AVK6 867 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 LCHNA4D1U4 455 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CFAP73A6NFT4 308 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 LEFTY2O00292 366 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 RALBP11234 206 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 MYL4P12829 197 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 OGNP20774 298 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ZNF140P52738 457 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TAS2R39P59534 338 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 NCALDP61601 193 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TAF1AQ15573 450 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 FAM91A1Q658Y4 838 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 RETSATQ6NUM9 610 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ZYG11AQ6WRX3 759 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 METTL3Q86U44 580 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CEP97Q8IW35 865 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 MFN1Q8IWA4 741 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 BBS7Q8IWZ6 715 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CENPLQ8N0S6 344 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 LEMD2Q8NC56 503 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 FIBINQ8TAL6 211 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 BLOC1S5Q8TDH9 187 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 POF1BQ8WVV4 589 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SREK1Q8WXA9 508 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ERP27Q96DN0 273 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 GPR78Q96P69 363 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CORO1BQ9BR76 489 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 C2orf49Q9BVC5 232 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TMEM120AQ9BXJ8 343 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ADGRE3Q9BY15 652 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 C20orf27Q9GZN8 174 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 NLE1Q9NVX2 485 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 DCTN4Q9UJW0 460 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 KCTD3Q9Y597 815 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 RAI2Q9Y5P3 530 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 A0A0G2JND7 137 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TMEM114B3SHH9 223 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TARM1B6A8C7 271 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 NRG2O14511 850 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 PHGDHO43175 533 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 KLHL2O95198 593 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 EN2P19622 333 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 GMPRP36959 345 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SLC26A3P40879 764 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SLC1A6P48664 564 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CSNK1DP48730 415 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 AP1S1P61966 158 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 MRNIPQ6NTE8 343 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 CNSTQ6PJW8 725 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TNS4Q8IZW8 715 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 MICALL1Q8N3F8 863 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 OR6P1Q8NGX9 317 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SHKBP1Q8TBC3 707 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 WFDC5Q8TCV5 224 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SLC22A17Q8WUG5 538 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SKA1Q96BD8 255 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ELMO2Q96JJ3 720 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 DNAJC1Q96KC8 554 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TBATAQ96M53 351 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 MTIF3Q9H2K0 278 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 STN1Q9H668 368 aaKnown RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 SAR1AQ9NR31 198 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 FBXO6Q9NRD1 293 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 TXLNGQ9NUQ3 528 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 KIAA1522Q9P206 1035 aaPredicted RBP14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ARL5AQ9Y689 179 aa14.38□□□□□ -0.11
RTFDC1-201ENST00000023939 ALPK3Q96L96 1907 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 CCDC162PA2VCL2 907 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 LINC01553A4QN01 128 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 AURKAO14965 403 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 CCL16O15467 120 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 FZD6O60353 706 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 TRIM13O60858 407 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 UNC5CO95185 931 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 WISP3O95389 354 aaPredicted RBP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 GLP2RO95838 553 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 RB1P06400 928 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 POU2F2P09086 479 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 HNRNPA1P09651 372 aaKnown RBP eCLIP14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 MYL2P10916 166 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 PTPN2P17706 415 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 CCR2P41597 374 aa14.37□□□□□ -0.11
RTFDC1-201ENST00000023939 KPNA2P52292 529 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms