RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TDRD15B5MCY1 1934 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 DIP2BQ9P265 1576 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 A0A087X0T9 212 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ANKDD1BA6NHY2 528 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 HDAC3O15379 428 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RSL1D1O76021 490 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 RLN2P04090 185 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TFE3P19532 575 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 CFL1P23528 166 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ALDH4A1P30038 563 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 OMPP47874 163 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 MTAPQ13126 283 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 FSCN1Q16658 493 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PI16Q6UXB8 463 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZZZ3Q8IYH5 903 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 B3GALNT2Q8NCR0 500 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SLC2A11Q9BYW1 496 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PCDHA11Q9Y5I1 949 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 SALL1Q9NSC2 1324 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 WRBO00258 174 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 XKRYO14609 159 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TRMUO75648 421 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 C7P10643 843 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ALOX12P18054 663 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 IGFALSP35858 605 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 GRIA1P42261 906 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 POU5F1Q01860 360 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 TDGQ13569 410 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF514Q96K75 400 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 QTRT2Q9H974 415 aaKnown RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF70Q9UC06 446 aaPredicted RBP6.11□□□□□ -1.43
VPS13D-201ENST00000011700 ZNF780BQ9Y6R6 833 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 COL1A2P08123 1366 aa6.11□□□□□ -1.43
VPS13D-201ENST00000011700 PER2O15055 1255 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 B3GAT3O94766 335 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 MTHFD1P11586 935 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 BTN3A2P78410 334 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PGS1Q32NB8 556 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PDCD4Q53EL6 469 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 EFCAB12Q6NXP0 572 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ZCCHC12Q6PEW1 402 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ASB18Q6ZVZ8 466 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TXNRD3Q86VQ6 643 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 RANBP3LQ86VV4 465 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SLC9A9Q8IVB4 645 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PGBD3Q8N328 593 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 LRRC71Q8N4P6 559 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 CAMKK1Q8N5S9 505 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SLC9A6Q92581 669 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 FAM84AQ96KN4 292 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ACTR6Q9GZN1 396 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PTTG2Q9NZH5 202 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TMEM9Q9P0T7 183 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TRPC4Q9UBN4 977 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SNX8Q9Y5X2 465 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ATG2BQ96BY7 2078 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TCN1P20061 433 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 S100A2P29034 98 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 MAGEA2P43356 314 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PTPN11Q06124 597 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 FGL1Q08830 312 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 CDKAL1Q5VV42 579 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ATG14Q6ZNE5 492 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 BEND5Q7L4P6 421 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 AENQ8WTP8 325 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 NSMCE3Q96MG7 304 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 GPC6Q9Y625 555 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 FADS2P1A8MWK0 482 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SEC22BO75396 215 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 OXSR1O95747 527 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 COL5A2P05997 1499 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 RHOCP08134 193 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 LTA4HP09960 611 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 MMP13P45452 471 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ALDH9A1P49189 494 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TXNL4AP83876 142 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PON3Q15166 354 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 MFSD7Q6UXD7 560 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 LRRC69Q6ZNQ3 347 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TSHZ1Q6ZSZ6 1077 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 MSANTD1Q6ZTZ1 278 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 CHSY3Q70JA7 882 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 STK32CQ86UX6 486 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 BRSK2Q8IWQ3 736 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 IPCEF1Q8WWN9 437 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 ISCA1Q9BUE6 129 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 LRRC19Q9H756 370 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 TAS2R1Q9NYW7 299 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 LIMD1Q9UGP4 676 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SLC12A4Q9UP95 1085 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 DOCK11Q5JSL3 2073 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 hCG_2014768A0A024R1R8 64 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 SIGLEC16A6NMB1 481 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 NOS1APO75052 506 aaPredicted RBP6.1□□□□□ -1.43
VPS13D-201ENST00000011700 PMPCBO75439 489 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 FGBP02675 491 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 FCGRTP55899 365 aa6.1□□□□□ -1.43
VPS13D-201ENST00000011700 RHOAP61586 193 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms