RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gpc6Q9R087 555 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psma7Q9Z2U0 248 aa9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psma5Q9Z2U1 241 aaKnown RBP9.15□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Susd1E9Q3H4 752 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pik3r2O08908 722 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyp2b19O55071 492 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Matn4O89029 624 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ptger3P30557 365 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kpna2P52293 529 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 DmpkP54265 631 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Psmc5P62196 406 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pkn1P70268 946 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Serpina5P70458 405 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Atp1b3P97370 278 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zc3h18Q0P678 948 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam131bQ3TY60 332 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam81aQ3UXZ6 364 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 EndouQ3V188 412 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc22a16Q497L8 649 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cd47Q61735 303 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rftn1Q6A0D4 554 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nap1l3Q794H2 544 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 AarsQ8BGQ7 968 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Klhl31Q8BWA5 634 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Teddm1bQ8CC62 306 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kiaa0391Q8JZY4 584 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Caap1Q8VDY9 356 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfr803Q8VFI3 308 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nmd3Q99L48 503 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CutalQ9D1U5 156 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 LlphQ9D945 130 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rpl9-ps1S4R1R7 191 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ighv15-2A0A0A6YX72 118 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CerklA2AQH1 525 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Krt36B1AQ75 473 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Usp17lbE9Q9U0 468 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Epha8O09127 1004 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 KeraO35367 351 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rasd1O35626 280 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Adh1P00329 375 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 SagP20443 403 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gria1P23818 907 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Lman2lP59481 347 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 SobpQ0P5V2 864 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Foxr1Q3UTB7 268 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gm1527Q3V0P3 650 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Glp2rQ5IXF8 512 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 DgkqQ6P5E8 934 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Znf18Q810A1 556 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mical2Q8BML1 960 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 B4gat1Q8BWP8 415 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gpr152Q8BXS7 511 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nuak2Q8BZN4 639 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mfsd9Q8C0T7 466 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slc39a6Q8C145 765 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 CenpuQ8C4M7 410 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Panx3Q8CEG0 392 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zmiz2Q8CIE2 920 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 P3h4Q8K2B0 443 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 FktnQ8R507 461 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Hnrnpul1Q8VDM6 859 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Oas1dQ8VI95 361 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdhb8Q91XZ2 779 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rad51cQ924H5 366 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mid1ip1Q9CQ20 182 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Batf3Q9D275 118 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 IqchQ9D2K4 1071 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Dctpp1Q9QY93 170 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 H2afyQ9QZQ8 372 aaKnown RBP9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ptdss2Q9Z1X2 473 aa9.14□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Znf541Q0GGX2 1363 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nav1Q8CH77 1875 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcdh7A0A0A6YY83 1255 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tmem156A0A1D5RLR8 321 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Mettl8A2AUU0 281 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Itih4A6X935 942 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kifc2O08672 792 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sp3O70494 783 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Slurp2P0DP59 97 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tnnc2P20801 160 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Pcsk2P21661 637 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Wnt7bP28047 349 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Rit2P70425 217 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Ncf4P97369 339 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 SelpQ01102 768 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cnnm1Q0GA42 951 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Cyp4f37Q3V1F1 546 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Wdr93Q402B2 695 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Sin3bQ62141 1098 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Nomo1Q6GQT9 1214 aaKnown RBP9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 ManeaQ6NXH2 462 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Prkab2Q6PAM0 271 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 GnasQ6R0H7 1133 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Kcnk12Q76M80 430 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Tas2r13Q7M720 305 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Fam212bQ80VY2 300 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zc3hav1lQ8BFR1 296 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Olfml2aQ8BHP7 681 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Zbtb33Q8BN78 671 aa9.13□□□□□ -0.95
Upf3b-201ENSMUST00000076265 Gpr4Q8BUD0 365 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 52.9 ms