RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TBX22Q9Y458 520 aa21.73■■□□□ 1.07
PHGDH-229ENST00000641891 OVOS2A0A0J9YW53 1432 aa21.73■■□□□ 1.07
PHGDH-229ENST00000641891 OVOS2Q6IE36 1432 aa21.73■■□□□ 1.07
PHGDH-229ENST00000641891 AAMPQ13685 434 aa21.72■■□□□ 1.07
PHGDH-229ENST00000641891 ATF7IPQ6VMQ6 1270 aa21.71■■□□□ 1.07
PHGDH-229ENST00000641891 THEMISQ8N1K5 641 aaPredicted RBP21.71■■□□□ 1.07
PHGDH-229ENST00000641891 DLG5Q8TDM6 1919 aa21.71■■□□□ 1.07
PHGDH-229ENST00000641891 PTCH1Q13635 1447 aa21.71■■□□□ 1.07
PHGDH-229ENST00000641891 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
PHGDH-229ENST00000641891 EIF4A2Q14240 407 aaKnown RBP21.7■■□□□ 1.06
PHGDH-229ENST00000641891 PEAK1Q9H792 1746 aa21.69■■□□□ 1.06
PHGDH-229ENST00000641891 NALCNQ8IZF0 1738 aa21.69■■□□□ 1.06
PHGDH-229ENST00000641891 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
PHGDH-229ENST00000641891 SOX12O15370 315 aa21.69■■□□□ 1.06
PHGDH-229ENST00000641891 AEBP1Q8IUX7 1158 aa21.69■■□□□ 1.06
PHGDH-229ENST00000641891 ITPRIPQ8IWB1 547 aa21.69■■□□□ 1.06
PHGDH-229ENST00000641891 FAM83GA6ND36 823 aa21.68■■□□□ 1.06
PHGDH-229ENST00000641891 SSH2Q76I76 1423 aa21.68■■□□□ 1.06
PHGDH-229ENST00000641891 TMEM57Q8N5G2 664 aa21.67■■□□□ 1.06
PHGDH-229ENST00000641891 TSPYL6Q8N831 410 aa21.67■■□□□ 1.06
PHGDH-229ENST00000641891 XRN1Q8IZH2 1706 aaKnown RBP21.66■■□□□ 1.06
PHGDH-229ENST00000641891 NBR1Q14596 966 aa21.66■■□□□ 1.06
PHGDH-229ENST00000641891 RWDD1Q9H446 243 aaPredicted RBP21.66■■□□□ 1.06
PHGDH-229ENST00000641891 MBIPQ9NS73 344 aa21.66■■□□□ 1.06
PHGDH-229ENST00000641891 KIF16BQ96L93 1317 aa21.66■■□□□ 1.06
PHGDH-229ENST00000641891 DCTN1Q14203 1278 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 ALDH1L2Q3SY69 923 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 IFT57Q9NWB7 429 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 PDZRN3Q9UPQ7 1066 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 ZNF853P0CG23 659 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 HSP90AB2PQ58FF8 381 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 SULT6B1Q6IMI4 303 aa21.65■■□□□ 1.06
PHGDH-229ENST00000641891 VIRMAQ69YN4 1812 aaKnown RBP21.64■■□□□ 1.06
PHGDH-229ENST00000641891 CALD1Q05682 793 aaKnown RBP21.64■■□□□ 1.06
PHGDH-229ENST00000641891 USP31Q70CQ4 1352 aa21.64■■□□□ 1.05
PHGDH-229ENST00000641891 VAMP4O75379 141 aa21.64■■□□□ 1.05
PHGDH-229ENST00000641891 GNAI1P63096 354 aa21.64■■□□□ 1.05
PHGDH-229ENST00000641891 DDX19BQ9UMR2 479 aa21.64■■□□□ 1.05
PHGDH-229ENST00000641891 ELL2O00472 640 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-229ENST00000641891 KCNA6P17658 529 aa21.63■■□□□ 1.05
PHGDH-229ENST00000641891 CEP170BQ9Y4F5 1589 aaPredicted RBP21.63■■□□□ 1.05
PHGDH-229ENST00000641891 NGDNQ8NEJ9 315 aaKnown RBP21.62■■□□□ 1.05
PHGDH-229ENST00000641891 IPO8O15397 1037 aaKnown RBP21.61■■□□□ 1.05
PHGDH-229ENST00000641891 LMOD3Q0VAK6 560 aa21.61■■□□□ 1.05
PHGDH-229ENST00000641891 RIMS1Q86UR5 1692 aaKnown RBP21.61■■□□□ 1.05
PHGDH-229ENST00000641891 RGPD1P0DJD0 1748 aa21.6■■□□□ 1.05
PHGDH-229ENST00000641891 DDRGK1Q96HY6 314 aa21.6■■□□□ 1.05
PHGDH-229ENST00000641891 TTC21AQ8NDW8 1320 aa21.6■■□□□ 1.05
PHGDH-229ENST00000641891 MRPL50Q8N5N7 158 aaKnown RBP21.6■■□□□ 1.05
PHGDH-229ENST00000641891 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
PHGDH-229ENST00000641891 MAP3K19Q56UN5 1328 aa21.59■■□□□ 1.05
PHGDH-229ENST00000641891 C8orf58Q8NAV2 365 aa21.59■■□□□ 1.05
PHGDH-229ENST00000641891 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
PHGDH-229ENST00000641891 ZBTB40Q9NUA8 1239 aa21.58■■□□□ 1.05
PHGDH-229ENST00000641891 ZNF428Q96B54 188 aa21.58■■□□□ 1.04
PHGDH-229ENST00000641891 FMN2Q9NZ56 1722 aa21.57■■□□□ 1.04
PHGDH-229ENST00000641891 SEC24BO95487 1268 aa21.57■■□□□ 1.04
PHGDH-229ENST00000641891 BRPF1P55201 1214 aaPredicted RBP21.57■■□□□ 1.04
PHGDH-229ENST00000641891 TWISTNBQ3B726 338 aaPredicted RBP21.57■■□□□ 1.04
PHGDH-229ENST00000641891 SLC4A3P48751 1232 aa21.57■■□□□ 1.04
PHGDH-229ENST00000641891 HDAC1Q13547 482 aaPredicted RBP21.56■■□□□ 1.04
PHGDH-229ENST00000641891 MCM10Q7L590 875 aa21.55■■□□□ 1.04
PHGDH-229ENST00000641891 USP19O94966 1318 aa21.54■■□□□ 1.04
PHGDH-229ENST00000641891 NUTM2GQ5VZR2 741 aa21.54■■□□□ 1.04
PHGDH-229ENST00000641891 ANKARQ7Z5J8 1434 aa21.53■■□□□ 1.04
PHGDH-229ENST00000641891 SBNO1A3KN83 1393 aa21.53■■□□□ 1.04
PHGDH-229ENST00000641891 FLT4P35916 1363 aa21.52■■□□□ 1.04
PHGDH-229ENST00000641891 RBM33Q96EV2 1170 aaKnown RBP21.52■■□□□ 1.04
PHGDH-229ENST00000641891 PIK3R4Q99570 1358 aa21.51■■□□□ 1.03
PHGDH-229ENST00000641891 KRT24Q2M2I5 525 aa21.51■■□□□ 1.03
PHGDH-229ENST00000641891 ARHGEF10O15013 1369 aa21.51■■□□□ 1.03
PHGDH-229ENST00000641891 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
PHGDH-229ENST00000641891 AMPHP49418 695 aa21.5■■□□□ 1.03
PHGDH-229ENST00000641891 NLRP6P59044 892 aa21.5■■□□□ 1.03
PHGDH-229ENST00000641891 ARHGAP45Q92619 1136 aa21.5■■□□□ 1.03
PHGDH-229ENST00000641891 FOXO3O43524 673 aa21.49■■□□□ 1.03
PHGDH-229ENST00000641891 ZBTB7BO15156 539 aaPredicted RBP21.48■■□□□ 1.03
PHGDH-229ENST00000641891 SMC5Q8IY18 1101 aa21.48■■□□□ 1.03
PHGDH-229ENST00000641891 C1orf115Q9H7X2 142 aa21.48■■□□□ 1.03
PHGDH-229ENST00000641891 ABCC4O15439 1325 aa21.48■■□□□ 1.03
PHGDH-229ENST00000641891 ANKLE2Q86XL3 938 aa21.47■■□□□ 1.03
PHGDH-229ENST00000641891 EYA1Q99502 592 aa21.47■■□□□ 1.03
PHGDH-229ENST00000641891 CHD2O14647 1828 aaKnown RBP21.47■■□□□ 1.03
PHGDH-229ENST00000641891 CHL1O00533 1208 aa21.47■■□□□ 1.03
PHGDH-229ENST00000641891 MTHFSDQ2M296 383 aaKnown RBP21.47■■□□□ 1.03
PHGDH-229ENST00000641891 ZNF142P52746 1687 aaPredicted RBP21.46■■□□□ 1.03
PHGDH-229ENST00000641891 CRB1P82279 1406 aa21.46■■□□□ 1.03
PHGDH-229ENST00000641891 IGSF1Q8N6C5 1336 aa21.45■■□□□ 1.02
PHGDH-229ENST00000641891 KDRP35968 1356 aa21.44■■□□□ 1.02
PHGDH-229ENST00000641891 ABTB2Q8N961 1025 aa21.44■■□□□ 1.02
PHGDH-229ENST00000641891 MIS18AQ9NYP9 233 aa21.44■■□□□ 1.02
PHGDH-229ENST00000641891 DAXXQ9UER7 740 aaPredicted RBP21.44■■□□□ 1.02
PHGDH-229ENST00000641891 HOXC9P31274 260 aa21.43■■□□□ 1.02
PHGDH-229ENST00000641891 C14orf37Q86TY3 774 aa21.42■■□□□ 1.02
PHGDH-229ENST00000641891 API5Q9BZZ5 524 aaKnown RBP21.42■■□□□ 1.02
PHGDH-229ENST00000641891 ADAMTSL3P82987 1691 aa21.42■■□□□ 1.02
PHGDH-229ENST00000641891 NUCB1Q02818 461 aa21.41■■□□□ 1.02
PHGDH-229ENST00000641891 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
PHGDH-229ENST00000641891 USP54Q70EL1 1684 aa21.41■■□□□ 1.02
PHGDH-229ENST00000641891 LNPKQ9C0E8 428 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms