RNA–Protein interactions for RNA: ENST00000641261.1

LINC02228-202, Transcript of long intergenic non-protein coding RNA 2228, humanhuman

BASIC

Gene LINC02228, Length 2,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02228-202ENST00000641261 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
LINC02228-202ENST00000641261 IPO9Q96P70 1041 aaKnown RBP17.19■□□□□ 0.34
LINC02228-202ENST00000641261 PCDHB15Q9Y5E8 787 aa17.19■□□□□ 0.34
LINC02228-202ENST00000641261 KCNA6P17658 529 aa17.19■□□□□ 0.34
LINC02228-202ENST00000641261 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
LINC02228-202ENST00000641261 SOX12O15370 315 aa17.18■□□□□ 0.34
LINC02228-202ENST00000641261 TRIM27P14373 513 aa17.18■□□□□ 0.34
LINC02228-202ENST00000641261 NOP58Q9Y2X3 529 aaKnown RBP17.18■□□□□ 0.34
LINC02228-202ENST00000641261 EIF4A2Q14240 407 aaKnown RBP17.17■□□□□ 0.34
LINC02228-202ENST00000641261 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
LINC02228-202ENST00000641261 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
LINC02228-202ENST00000641261 FTSJ3Q8IY81 847 aaKnown RBP17.16■□□□□ 0.34
LINC02228-202ENST00000641261 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
LINC02228-202ENST00000641261 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
LINC02228-202ENST00000641261 USP31Q70CQ4 1352 aa17.15■□□□□ 0.34
LINC02228-202ENST00000641261 RGPD1P0DJD0 1748 aa17.15■□□□□ 0.34
LINC02228-202ENST00000641261 FMN2Q9NZ56 1722 aa17.15■□□□□ 0.34
LINC02228-202ENST00000641261 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
LINC02228-202ENST00000641261 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
LINC02228-202ENST00000641261 FAM83GA6ND36 823 aa17.14■□□□□ 0.34
LINC02228-202ENST00000641261 NOB1Q9ULX3 412 aaKnown RBP17.14■□□□□ 0.34
LINC02228-202ENST00000641261 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
LINC02228-202ENST00000641261 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
LINC02228-202ENST00000641261 ZNF142P52746 1687 aaPredicted RBP17.13■□□□□ 0.33
LINC02228-202ENST00000641261 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
LINC02228-202ENST00000641261 CHD2O14647 1828 aaKnown RBP17.12■□□□□ 0.33
LINC02228-202ENST00000641261 AAMPQ13685 434 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 SULT6B1Q6IMI4 303 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 TSPYL6Q8N831 410 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
LINC02228-202ENST00000641261 MBIPQ9NS73 344 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 MARF1Q9Y4F3 1742 aaKnown RBP17.11■□□□□ 0.33
LINC02228-202ENST00000641261 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 KIF16BQ96L93 1317 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 PIK3R4Q99570 1358 aa17.11■□□□□ 0.33
LINC02228-202ENST00000641261 ADAMTSL3P82987 1691 aa17.1■□□□□ 0.33
LINC02228-202ENST00000641261 ITPRIPQ8IWB1 547 aa17.1■□□□□ 0.33
LINC02228-202ENST00000641261 GNAI1P63096 354 aa17.1■□□□□ 0.33
LINC02228-202ENST00000641261 ANKARQ7Z5J8 1434 aa17.1■□□□□ 0.33
LINC02228-202ENST00000641261 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
LINC02228-202ENST00000641261 ALDH1L2Q3SY69 923 aa17.09■□□□□ 0.33
LINC02228-202ENST00000641261 TMEM57Q8N5G2 664 aa17.09■□□□□ 0.33
LINC02228-202ENST00000641261 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-202ENST00000641261 VAMP4O75379 141 aa17.09■□□□□ 0.33
LINC02228-202ENST00000641261 RBM33Q96EV2 1170 aaKnown RBP17.09■□□□□ 0.33
LINC02228-202ENST00000641261 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
LINC02228-202ENST00000641261 MYT1Q01538 1121 aa17.08■□□□□ 0.33
LINC02228-202ENST00000641261 LMOD3Q0VAK6 560 aa17.08■□□□□ 0.32
LINC02228-202ENST00000641261 CFAP44Q96MT7 982 aa17.08■□□□□ 0.32
LINC02228-202ENST00000641261 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
LINC02228-202ENST00000641261 SETD1BQ9UPS6 1966 aaKnown RBP17.07■□□□□ 0.32
LINC02228-202ENST00000641261 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
LINC02228-202ENST00000641261 FLT4P35916 1363 aa17.06■□□□□ 0.32
LINC02228-202ENST00000641261 NUTM2GQ5VZR2 741 aa17.06■□□□□ 0.32
LINC02228-202ENST00000641261 C8orf58Q8NAV2 365 aa17.06■□□□□ 0.32
LINC02228-202ENST00000641261 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
LINC02228-202ENST00000641261 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
LINC02228-202ENST00000641261 RWDD1Q9H446 243 aaPredicted RBP17.05■□□□□ 0.32
LINC02228-202ENST00000641261 PDZRN3Q9UPQ7 1066 aa17.05■□□□□ 0.32
LINC02228-202ENST00000641261 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
LINC02228-202ENST00000641261 BRPF1P55201 1214 aaPredicted RBP17.04■□□□□ 0.32
LINC02228-202ENST00000641261 NLRP6P59044 892 aa17.04■□□□□ 0.32
LINC02228-202ENST00000641261 TWISTNBQ3B726 338 aaPredicted RBP17.04■□□□□ 0.32
LINC02228-202ENST00000641261 MCM10Q7L590 875 aa17.04■□□□□ 0.32
LINC02228-202ENST00000641261 MRPL50Q8N5N7 158 aaKnown RBP17.04■□□□□ 0.32
LINC02228-202ENST00000641261 USP54Q70EL1 1684 aa17.03■□□□□ 0.32
LINC02228-202ENST00000641261 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
LINC02228-202ENST00000641261 ARHGEF10O15013 1369 aa17.03■□□□□ 0.32
LINC02228-202ENST00000641261 AMPHP49418 695 aa17.02■□□□□ 0.32
LINC02228-202ENST00000641261 KRT24Q2M2I5 525 aa17.01■□□□□ 0.31
LINC02228-202ENST00000641261 KDRP35968 1356 aa17.01■□□□□ 0.31
LINC02228-202ENST00000641261 FOXO3O43524 673 aa17.01■□□□□ 0.31
LINC02228-202ENST00000641261 HDAC1Q13547 482 aaPredicted RBP17■□□□□ 0.31
LINC02228-202ENST00000641261 ABTB2Q8N961 1025 aa17■□□□□ 0.31
LINC02228-202ENST00000641261 EYA1Q99502 592 aa17■□□□□ 0.31
LINC02228-202ENST00000641261 IGSF1Q8N6C5 1336 aa16.99■□□□□ 0.31
LINC02228-202ENST00000641261 LTN1O94822 1766 aa16.99■□□□□ 0.31
LINC02228-202ENST00000641261 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
LINC02228-202ENST00000641261 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
LINC02228-202ENST00000641261 ADGRL3Q9HAR2 1447 aa16.98■□□□□ 0.31
LINC02228-202ENST00000641261 SEC24BO95487 1268 aa16.98■□□□□ 0.31
LINC02228-202ENST00000641261 CRB1P82279 1406 aa16.98■□□□□ 0.31
LINC02228-202ENST00000641261 CHL1O00533 1208 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 HOXC9P31274 260 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 ARHGAP45Q92619 1136 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 NWD1Q149M9 1564 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 ABCC4O15439 1325 aa16.97■□□□□ 0.31
LINC02228-202ENST00000641261 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
LINC02228-202ENST00000641261 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
LINC02228-202ENST00000641261 NBR1Q14596 966 aa16.96■□□□□ 0.31
LINC02228-202ENST00000641261 USP19O94966 1318 aa16.96■□□□□ 0.31
LINC02228-202ENST00000641261 SMC5Q8IY18 1101 aa16.95■□□□□ 0.3
LINC02228-202ENST00000641261 C1orf115Q9H7X2 142 aa16.95■□□□□ 0.3
LINC02228-202ENST00000641261 DDRGK1Q96HY6 314 aa16.94■□□□□ 0.3
LINC02228-202ENST00000641261 MIS18AQ9NYP9 233 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms