RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 ZNF335Q9H4Z2 1342 aaPredicted RBP27.9■■■□□ 2.06
SPIN3-244ENST00000640728 KIF24Q5T7B8 1368 aa27.9■■■□□ 2.06
SPIN3-244ENST00000640728 NEFMP07197 916 aa27.9■■■□□ 2.06
SPIN3-244ENST00000640728 AMPHP49418 695 aa27.9■■■□□ 2.06
SPIN3-244ENST00000640728 KRT28Q7Z3Y7 464 aa27.9■■■□□ 2.06
SPIN3-244ENST00000640728 RIPK4P57078 832 aa27.89■■■□□ 2.06
SPIN3-244ENST00000640728 XPCQ01831 940 aaPredicted RBP27.89■■■□□ 2.06
SPIN3-244ENST00000640728 PHACTR3Q96KR7 559 aa27.89■■■□□ 2.06
SPIN3-244ENST00000640728 KIF1AQ12756 1690 aa27.88■■■□□ 2.05
SPIN3-244ENST00000640728 NFE2L2Q16236 605 aa27.84■■■□□ 2.05
SPIN3-244ENST00000640728 HOXC9P31274 260 aa27.84■■■□□ 2.05
SPIN3-244ENST00000640728 SULT6B1Q6IMI4 303 aa27.84■■■□□ 2.05
SPIN3-244ENST00000640728 KCNH5Q8NCM2 988 aa27.84■■■□□ 2.05
SPIN3-244ENST00000640728 AEBP1Q8IUX7 1158 aa27.82■■■□□ 2.04
SPIN3-244ENST00000640728 PPP4R2Q9NY27 417 aa27.82■■■□□ 2.04
SPIN3-244ENST00000640728 MYH16Q9H6N6 1097 aa27.81■■■□□ 2.04
SPIN3-244ENST00000640728 XIRP1Q702N8 1843 aaKnown RBP27.81■■■□□ 2.04
SPIN3-244ENST00000640728 ARHGEF10O15013 1369 aa27.81■■■□□ 2.04
SPIN3-244ENST00000640728 IL16Q14005 1332 aa27.81■■■□□ 2.04
SPIN3-244ENST00000640728 TRPM3Q9HCF6 1732 aaPredicted RBP27.8■■■□□ 2.04
SPIN3-244ENST00000640728 NFAT5O94916 1531 aa27.8■■■□□ 2.04
SPIN3-244ENST00000640728 RTL1A6NKG5 1358 aa27.79■■■□□ 2.04
SPIN3-244ENST00000640728 RGPD1P0DJD0 1748 aa27.79■■■□□ 2.04
SPIN3-244ENST00000640728 USP19O94966 1318 aa27.78■■■□□ 2.04
SPIN3-244ENST00000640728 GCP02774 474 aa27.77■■■□□ 2.04
SPIN3-244ENST00000640728 LMOD2Q6P5Q4 547 aa27.77■■■□□ 2.04
SPIN3-244ENST00000640728 IP6K1Q92551 441 aa27.77■■■□□ 2.04
SPIN3-244ENST00000640728 EYA1Q99502 592 aa27.77■■■□□ 2.04
SPIN3-244ENST00000640728 NPHP3Q7Z494 1330 aa27.76■■■□□ 2.03
SPIN3-244ENST00000640728 IGSF1Q8N6C5 1336 aa27.76■■■□□ 2.03
SPIN3-244ENST00000640728 DDX17Q92841 729 aaKnown RBP27.76■■■□□ 2.03
SPIN3-244ENST00000640728 SLIT3O75094 1523 aa27.75■■■□□ 2.03
SPIN3-244ENST00000640728 PLIN1O60240 522 aa27.75■■■□□ 2.03
SPIN3-244ENST00000640728 KDRP35968 1356 aa27.74■■■□□ 2.03
SPIN3-244ENST00000640728 BRINP3Q76B58 766 aa27.72■■■□□ 2.03
SPIN3-244ENST00000640728 ARHGEF25Q86VW2 580 aa27.72■■■□□ 2.03
SPIN3-244ENST00000640728 FANCIQ9NVI1 1328 aa27.72■■■□□ 2.03
SPIN3-244ENST00000640728 LMOD3Q0VAK6 560 aa27.71■■■□□ 2.03
SPIN3-244ENST00000640728 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
SPIN3-244ENST00000640728 TSR2Q969E8 191 aaKnown RBP27.69■■■□□ 2.02
SPIN3-244ENST00000640728 ALS2Q96Q42 1657 aa27.69■■■□□ 2.02
SPIN3-244ENST00000640728 CALD1Q05682 793 aaKnown RBP27.69■■■□□ 2.02
SPIN3-244ENST00000640728 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.68■■■□□ 2.02
SPIN3-244ENST00000640728 PXDNQ92626 1479 aa27.68■■■□□ 2.02
SPIN3-244ENST00000640728 BCAR3O75815 825 aa27.68■■■□□ 2.02
SPIN3-244ENST00000640728 LTV1Q96GA3 475 aaPredicted RBP27.68■■■□□ 2.02
SPIN3-244ENST00000640728 LTN1O94822 1766 aa27.67■■■□□ 2.02
SPIN3-244ENST00000640728 CT47B1P0C2W7 299 aaPredicted RBP27.66■■■□□ 2.02
SPIN3-244ENST00000640728 EXOC6Q8TAG9 804 aa27.66■■■□□ 2.02
SPIN3-244ENST00000640728 PHRF1Q9P1Y6 1649 aaKnown RBP27.66■■■□□ 2.02
SPIN3-244ENST00000640728 RARSP54136 660 aaKnown RBP27.66■■■□□ 2.02
SPIN3-244ENST00000640728 THUMPD2Q9BTF0 503 aaKnown RBP27.66■■■□□ 2.02
SPIN3-244ENST00000640728 SPATA31A3Q5VYP0 1347 aa27.65■■■□□ 2.02
SPIN3-244ENST00000640728 PLEKHG5O94827 1062 aa27.65■■■□□ 2.02
SPIN3-244ENST00000640728 TNS3Q68CZ2 1445 aa27.64■■■□□ 2.02
SPIN3-244ENST00000640728 ZBTB7CA1YPR0 619 aa27.64■■■□□ 2.01
SPIN3-244ENST00000640728 EXOSC9Q06265 439 aaKnown RBP27.64■■■□□ 2.01
SPIN3-244ENST00000640728 C20orf194Q5TEA3 1177 aa27.63■■■□□ 2.01
SPIN3-244ENST00000640728 B4GALNT3Q6L9W6 998 aa27.63■■■□□ 2.01
SPIN3-244ENST00000640728 MED1Q15648 1581 aaPredicted RBP27.63■■■□□ 2.01
SPIN3-244ENST00000640728 FAM83GA6ND36 823 aa27.62■■■□□ 2.01
SPIN3-244ENST00000640728 ZNF853P0CG23 659 aa27.62■■■□□ 2.01
SPIN3-244ENST00000640728 IFT57Q9NWB7 429 aa27.62■■■□□ 2.01
SPIN3-244ENST00000640728 GNAI1P63096 354 aa27.61■■■□□ 2.01
SPIN3-244ENST00000640728 MTHFSDQ2M296 383 aaKnown RBP27.61■■■□□ 2.01
SPIN3-244ENST00000640728 PELP1Q8IZL8 1130 aaKnown RBP27.6■■■□□ 2.01
SPIN3-244ENST00000640728 DCTN1Q14203 1278 aa27.59■■■□□ 2.01
SPIN3-244ENST00000640728 NBPF6Q5VWK0 638 aa27.59■■■□□ 2.01
SPIN3-244ENST00000640728 NBPF4Q96M43 638 aa27.59■■■□□ 2.01
SPIN3-244ENST00000640728 CRBNQ96SW2 442 aa27.59■■■□□ 2.01
SPIN3-244ENST00000640728 SOS2Q07890 1332 aaPredicted RBP27.59■■■□□ 2.01
SPIN3-244ENST00000640728 CFAP44Q96MT7 982 aa27.59■■■□□ 2.01
SPIN3-244ENST00000640728 LAS1LQ9Y4W2 734 aaKnown RBP27.59■■■□□ 2.01
SPIN3-244ENST00000640728 DLG5Q8TDM6 1919 aa27.58■■■□□ 2.01
SPIN3-244ENST00000640728 GAS2L2Q8NHY3 880 aa27.58■■■□□ 2.01
SPIN3-244ENST00000640728 AXIN2Q9Y2T1 843 aa27.57■■■□□ 2
SPIN3-244ENST00000640728 ZC3H6P61129 1189 aaKnown RBP27.57■■■□□ 2
SPIN3-244ENST00000640728 USHBP1Q8N6Y0 703 aa27.56■■■□□ 2
SPIN3-244ENST00000640728 CCDC136Q96JN2 1154 aa27.55■■■□□ 2
SPIN3-244ENST00000640728 MBIPQ9NS73 344 aa27.55■■■□□ 2
SPIN3-244ENST00000640728 CABLES1Q8TDN4 633 aa27.54■■■□□ 2
SPIN3-244ENST00000640728 ANKRD24Q8TF21 1146 aa27.54■■■□□ 2
SPIN3-244ENST00000640728 MCM10Q7L590 875 aa27.53■■■□□ 2
SPIN3-244ENST00000640728 LRRC59Q96AG4 307 aaKnown RBP27.53■■■□□ 2
SPIN3-244ENST00000640728 PDE3AQ14432 1141 aa27.52■■■□□ 2
SPIN3-244ENST00000640728 HTATSF1O43719 755 aaKnown RBP27.51■■■□□ 2
SPIN3-244ENST00000640728 BCL2L13Q9BXK5 485 aa27.51■■□□□ 1.99
SPIN3-244ENST00000640728 NCAPD2Q15021 1401 aa27.5■■□□□ 1.99
SPIN3-244ENST00000640728 RTF1Q92541 710 aaKnown RBP27.49■■□□□ 1.99
SPIN3-244ENST00000640728 CRB1P82279 1406 aa27.49■■□□□ 1.99
SPIN3-244ENST00000640728 CHL1O00533 1208 aa27.49■■□□□ 1.99
SPIN3-244ENST00000640728 FRAT1Q92837 279 aaPredicted RBP27.49■■□□□ 1.99
SPIN3-244ENST00000640728 CANXP27824 592 aaKnown RBP27.48■■□□□ 1.99
SPIN3-244ENST00000640728 SSH1Q8WYL5 1049 aa27.48■■□□□ 1.99
SPIN3-244ENST00000640728 ZNF428Q96B54 188 aa27.48■■□□□ 1.99
SPIN3-244ENST00000640728 ERBB3P21860 1342 aa27.48■■□□□ 1.99
SPIN3-244ENST00000640728 CPDO75976 1380 aa27.47■■□□□ 1.99
SPIN3-244ENST00000640728 GNAT3A8MTJ3 354 aa27.47■■□□□ 1.99
SPIN3-244ENST00000640728 VAMP4O75379 141 aa27.46■■□□□ 1.99
SPIN3-244ENST00000640728 SMC4Q9NTJ3 1288 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms