RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 ATP6V1DQ9Y5K8 247 aa6.84□□□□□ -1.31
SCN3A-210ENST00000640652 MYH8P13535 1937 aa6.84□□□□□ -1.31
SCN3A-210ENST00000640652 PRKAR2BP31323 418 aa6.84□□□□□ -1.32
SCN3A-210ENST00000640652 EXOSC9Q06265 439 aaKnown RBP6.84□□□□□ -1.32
SCN3A-210ENST00000640652 MYH15Q9Y2K3 1946 aa6.84□□□□□ -1.32
SCN3A-210ENST00000640652 DIP2CQ9Y2E4 1556 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 YTHDC2Q9H6S0 1430 aaKnown RBP6.83□□□□□ -1.32
SCN3A-210ENST00000640652 LRRC7Q96NW7 1537 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
SCN3A-210ENST00000640652 GGNBP2Q9H3C7 697 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 MCM2P49736 904 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 DDX49Q9Y6V7 483 aaKnown RBP6.83□□□□□ -1.32
SCN3A-210ENST00000640652 IGHDP01880 384 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 MCM4P33991 863 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 CDK19Q9BWU1 502 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 TBC1D2Q9BYX2 928 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 OS9Q13438 667 aaPredicted RBP6.83□□□□□ -1.32
SCN3A-210ENST00000640652 TMEM57Q8N5G2 664 aa6.83□□□□□ -1.32
SCN3A-210ENST00000640652 ADGRB1O14514 1584 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 CHD2O14647 1828 aaKnown RBP6.82□□□□□ -1.32
SCN3A-210ENST00000640652 KIAA2012Q0VF49 1180 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 NFE2L2Q16236 605 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 ARHGAP45Q92619 1136 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 K7ELQ4 463 aaPredicted RBP6.82□□□□□ -1.32
SCN3A-210ENST00000640652 DNTTIP2Q5QJE6 756 aaKnown RBP6.82□□□□□ -1.32
SCN3A-210ENST00000640652 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.82□□□□□ -1.32
SCN3A-210ENST00000640652 CDK12Q9NYV4 1490 aaPredicted RBP6.82□□□□□ -1.32
SCN3A-210ENST00000640652 MYH2Q9UKX2 1941 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 NUCB1Q02818 461 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 CARD14Q9BXL6 1004 aa6.82□□□□□ -1.32
SCN3A-210ENST00000640652 TRIM6-TRIM34B2RNG4 842 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 CWC22Q9HCG8 908 aaKnown RBP6.81□□□□□ -1.32
SCN3A-210ENST00000640652 HSP90AA2PQ14568 343 aaPredicted RBP6.81□□□□□ -1.32
SCN3A-210ENST00000640652 GOLGA6L6A8MZA4 724 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 TULP4Q9NRJ4 1543 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 EDC4Q6P2E9 1401 aaKnown RBP6.81□□□□□ -1.32
SCN3A-210ENST00000640652 CCDC173Q0VFZ6 552 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 TWISTNBQ3B726 338 aaPredicted RBP6.81□□□□□ -1.32
SCN3A-210ENST00000640652 PPP6R1Q9UPN7 881 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 EID1Q9Y6B2 187 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 DLC1Q96QB1 1528 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 FER1L4A9Z1Z3 1794 aa6.81□□□□□ -1.32
SCN3A-210ENST00000640652 HMOX1P09601 288 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 C14orf37Q86TY3 774 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 SKAP1Q86WV1 359 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 MBD3O95983 291 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 APBB1O00213 710 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 KCNJ4P48050 445 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
SCN3A-210ENST00000640652 GRPEL1Q9HAV7 217 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 RIMS2Q9UQ26 1411 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 ALKQ9UM73 1620 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 CABP1Q9NZU7 370 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 PCDHB15Q9Y5E8 787 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 SNX21Q969T3 373 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 ZNF692Q9BU19 519 aaPredicted RBP6.8□□□□□ -1.32
SCN3A-210ENST00000640652 PPIP5K1Q6PFW1 1433 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 PTPRCP08575 1304 aa6.8□□□□□ -1.32
SCN3A-210ENST00000640652 MYH3P11055 1940 aa6.79□□□□□ -1.32
SCN3A-210ENST00000640652 TTC21BQ7Z4L5 1316 aa6.79□□□□□ -1.32
SCN3A-210ENST00000640652 ZRSR1Q15695 479 aaKnown RBP6.79□□□□□ -1.32
SCN3A-210ENST00000640652 ARHGAP31Q2M1Z3 1444 aa6.79□□□□□ -1.32
SCN3A-210ENST00000640652 AMPHP49418 695 aa6.79□□□□□ -1.32
SCN3A-210ENST00000640652 SMC5Q8IY18 1101 aa6.79□□□□□ -1.32
SCN3A-210ENST00000640652 CDC42BPGQ6DT37 1551 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 SLC4A10Q6U841 1118 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 HTATSF1O43719 755 aaKnown RBP6.78□□□□□ -1.32
SCN3A-210ENST00000640652 SRCIN1Q9C0H9 1055 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 GOLGA6L4A6NEF3 574 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 RAPGEF3O95398 923 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 MTERF4Q7Z6M4 381 aaKnown RBP6.78□□□□□ -1.32
SCN3A-210ENST00000640652 SPINK5Q9NQ38 1064 aaPredicted RBP6.78□□□□□ -1.32
SCN3A-210ENST00000640652 ERC2O15083 957 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 RIMS1Q86UR5 1692 aaKnown RBP6.78□□□□□ -1.32
SCN3A-210ENST00000640652 MYH10P35580 1976 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 TPM2P07951 284 aa6.78□□□□□ -1.32
SCN3A-210ENST00000640652 FAM208AQ9UK61 1670 aaKnown RBP6.78□□□□□ -1.32
SCN3A-210ENST00000640652 MLECQ14165 292 aa6.77□□□□□ -1.32
SCN3A-210ENST00000640652 FOXD4L1Q9NU39 408 aa6.77□□□□□ -1.32
SCN3A-210ENST00000640652 GNAI3P08754 354 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 RLBP1P12271 317 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 GAS2L2Q8NHY3 880 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 C3P01024 1663 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 KIF24Q5T7B8 1368 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 NRDCO43847 1150 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 MCTP1Q6DN14 999 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 IDI1Q13907 227 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 RUFY2Q8WXA3 655 aa6.77□□□□□ -1.33
SCN3A-210ENST00000640652 ELL2O00472 640 aaPredicted RBP6.76□□□□□ -1.33
SCN3A-210ENST00000640652 GNAI2P04899 355 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 CCDC61Q9Y6R9 512 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 TUBGCP6Q96RT7 1819 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 MYH13Q9UKX3 1938 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 PDIA4P13667 645 aaKnown RBP6.76□□□□□ -1.33
SCN3A-210ENST00000640652 TBC1D9Q6ZT07 1266 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 NGDNQ8NEJ9 315 aaKnown RBP6.76□□□□□ -1.33
SCN3A-210ENST00000640652 NALCNQ8IZF0 1738 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 FAM135BQ49AJ0 1406 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 C1orf115Q9H7X2 142 aa6.76□□□□□ -1.33
SCN3A-210ENST00000640652 ZBTB40Q9NUA8 1239 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms