RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 CAPN15O75808 1086 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 FAM200BP0CF97 657 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 SETSIPP0DME0 302 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 DNAJC21Q5F1R6 531 aaKnown RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 MRRFQ96E11 262 aaKnown RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 KIAA1522Q9P206 1035 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 AKNAQ7Z591 1439 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 KIF16BQ96L93 1317 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 GABPB1Q06547 395 aaPredicted RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 GOLGA6L1Q8N7Z2 621 aa7.39□□□□□ -1.23
NECAP1-222ENST00000640072 G3BP2Q9UN86 482 aaKnown RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 CHCHD3Q9NX63 227 aaKnown RBP7.39□□□□□ -1.23
NECAP1-222ENST00000640072 CCDC175P0C221 793 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 RSPH1Q8WYR4 309 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 RSPH9Q9H1X1 276 aaPredicted RBP7.38□□□□□ -1.23
NECAP1-222ENST00000640072 IRAK4Q9NWZ3 460 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 CHAF1AQ13111 956 aaPredicted RBP7.38□□□□□ -1.23
NECAP1-222ENST00000640072 ERCC4Q92889 916 aaPredicted RBP7.38□□□□□ -1.23
NECAP1-222ENST00000640072 IGSF5Q9NSI5 407 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 RABL2BQ9UNT1 228 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 CEP162Q5TB80 1403 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 SMARCA4P51532 1647 aa7.38□□□□□ -1.23
NECAP1-222ENST00000640072 GAS2L2Q8NHY3 880 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 SLC26A8Q96RN1 970 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 BAZ1AQ9NRL2 1556 aaPredicted RBP7.37□□□□□ -1.23
NECAP1-222ENST00000640072 HTATSF1O43719 755 aaKnown RBP7.37□□□□□ -1.23
NECAP1-222ENST00000640072 HMMRO75330 724 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 ABL2P42684 1182 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 PSMC1P62191 440 aaKnown RBP7.37□□□□□ -1.23
NECAP1-222ENST00000640072 CCDC34Q96HJ3 373 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 DEF6Q9H4E7 631 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 PSMD2Q13200 908 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 PABPN1Q86U42 306 aaKnown RBP eCLIP7.37□□□□□ -1.23
NECAP1-222ENST00000640072 CCDC146Q8IYE0 955 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 RASSF4Q9H2L5 321 aa7.37□□□□□ -1.23
NECAP1-222ENST00000640072 TMCO5BA8MYB1 307 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 CAND2O75155 1236 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 PPP2R5AQ15172 486 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 CCDC47Q96A33 483 aaKnown RBP7.36□□□□□ -1.23
NECAP1-222ENST00000640072 FAM117AQ9C073 453 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 ABCF2Q9UG63 623 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 FAN1Q9Y2M0 1017 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 DYTNA2CJ06 578 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 KLHL33A6NCF5 533 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 WRNQ14191 1432 aaPredicted RBP eCLIP7.36□□□□□ -1.23
NECAP1-222ENST00000640072 TSC1Q92574 1164 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 hCG_2014768A0A024R1R8 64 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 ECEL1O95672 775 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 U2AF2P26368 475 aaKnown RBP eCLIP7.36□□□□□ -1.233e-6■■■■□ 23.7
NECAP1-222ENST00000640072 FEZ1Q99689 392 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 KNSTRNQ9Y448 316 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 DMRT2Q9Y5R5 561 aa7.36□□□□□ -1.23
NECAP1-222ENST00000640072 CFAP69A5D8W1 941 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
NECAP1-222ENST00000640072 STK11IPQ8N1F8 1099 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 MYRIPQ8NFW9 859 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 ZNF396Q96N95 335 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-222ENST00000640072 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 ATP1B4Q9UN42 357 aaPredicted RBP7.35□□□□□ -1.23
NECAP1-222ENST00000640072 IGF1RP08069 1367 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 KIF3CO14782 793 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 SF3B2Q13435 895 aaKnown RBP7.35□□□□□ -1.23
NECAP1-222ENST00000640072 NEUROD6Q96NK8 337 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 OGFRQ9NZT2 677 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 PHF8Q9UPP1 1060 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 SENP3-EIF4A1A0A087X0R7 540 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 CD151P48509 253 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
NECAP1-222ENST00000640072 PAGR1Q9BTK6 254 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 CHPF2Q9P2E5 772 aa7.35□□□□□ -1.23
NECAP1-222ENST00000640072 KIF5CO60282 957 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 CADPS2Q86UW7 1296 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 PRIMPOLQ96LW4 560 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 SUFUQ9UMX1 484 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 EIF4G1Q04637 1599 aaKnown RBP7.34□□□□□ -1.23
NECAP1-222ENST00000640072 IGHDP01880 384 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 NBPF7P0C2Y1 421 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-222ENST00000640072 TAX1BP1Q86VP1 789 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 KLHL23Q8NBE8 558 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 PANK3Q9H999 370 aa7.34□□□□□ -1.23
NECAP1-222ENST00000640072 POU5F1Q01860 360 aaKnown RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 SKOR2Q2VWA4 1001 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 HS1BP3Q53T59 392 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 PHC3Q8NDX5 983 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 ENOX1Q8TC92 643 aaKnown RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 BRMS1Q9HCU9 246 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 CHMP5Q9NZZ3 219 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 BIN2Q9UBW5 565 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 USP25Q9UHP3 1055 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 NOL7Q9UMY1 257 aaKnown RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 SMARCA2P51531 1590 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 CBFA2T2O43439 604 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 FAM160A1Q05DH4 1040 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 INF2Q27J81 1249 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 JMYQ8N9B5 988 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 RBM46Q8TBY0 533 aaKnown RBP7.33□□□□□ -1.24
NECAP1-222ENST00000640072 FAM212AQ96EL1 285 aa7.33□□□□□ -1.24
NECAP1-222ENST00000640072 IVNS1ABPQ9Y6Y0 642 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms