RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 SSH2Q76I76 1423 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 AKAP12Q02952 1782 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 MAP2P11137 1827 aaKnown RBP11.01□□□□□ -0.65
NECAP1-218ENST00000639595 HMOX1P09601 288 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 RGS3P49796 1198 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
NECAP1-218ENST00000639595 PTCH1Q13635 1447 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
NECAP1-218ENST00000639595 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
NECAP1-218ENST00000639595 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
NECAP1-218ENST00000639595 IFT57Q9NWB7 429 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 KIF16BQ96L93 1317 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 OVOS2A0A0J9YW53 1432 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 USP6P35125 1406 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 OVOS2Q6IE36 1432 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 DDRGK1Q96HY6 314 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 NOB1Q9ULX3 412 aaKnown RBP11□□□□□ -0.65
NECAP1-218ENST00000639595 USP31Q70CQ4 1352 aa11□□□□□ -0.65
NECAP1-218ENST00000639595 GNAI1P63096 354 aa10.99□□□□□ -0.65
NECAP1-218ENST00000639595 LMOD3Q0VAK6 560 aa10.99□□□□□ -0.65
NECAP1-218ENST00000639595 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
NECAP1-218ENST00000639595 TOPAZ1Q8N9V7 1692 aa10.98□□□□□ -0.65
NECAP1-218ENST00000639595 KCNA4P22459 653 aa10.98□□□□□ -0.65
NECAP1-218ENST00000639595 HDAC1Q13547 482 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-218ENST00000639595 VAMP4O75379 141 aa10.98□□□□□ -0.65
NECAP1-218ENST00000639595 ARHGAP45Q92619 1136 aa10.98□□□□□ -0.65
NECAP1-218ENST00000639595 NRKQ7Z2Y5 1582 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 TTC21AQ8NDW8 1320 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 DIP2AQ14689 1571 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 ITSN1Q15811 1721 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 EIF4A2Q14240 407 aaKnown RBP10.97□□□□□ -0.65
NECAP1-218ENST00000639595 HOMEZQ8IX15 550 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 BCL11AQ9H165 835 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 ZBTB40Q9NUA8 1239 aa10.97□□□□□ -0.65
NECAP1-218ENST00000639595 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
NECAP1-218ENST00000639595 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
NECAP1-218ENST00000639595 TMEM57Q8N5G2 664 aa10.96□□□□□ -0.66
NECAP1-218ENST00000639595 THUMPD2Q9BTF0 503 aaKnown RBP10.96□□□□□ -0.66
NECAP1-218ENST00000639595 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
NECAP1-218ENST00000639595 ITPRIPQ8IWB1 547 aa10.95□□□□□ -0.66
NECAP1-218ENST00000639595 MRPL50Q8N5N7 158 aaKnown RBP10.95□□□□□ -0.66
NECAP1-218ENST00000639595 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
NECAP1-218ENST00000639595 SMC5Q8IY18 1101 aa10.94□□□□□ -0.66
NECAP1-218ENST00000639595 TSPYL6Q8N831 410 aa10.94□□□□□ -0.66
NECAP1-218ENST00000639595 LAS1LQ9Y4W2 734 aaKnown RBP10.94□□□□□ -0.66
NECAP1-218ENST00000639595 USP19O94966 1318 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 SULT6B1Q6IMI4 303 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 HSP90AB2PQ58FF8 381 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 AEBP1Q8IUX7 1158 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 FER1L4A9Z1Z3 1794 aa10.93□□□□□ -0.66
NECAP1-218ENST00000639595 NALCNQ8IZF0 1738 aa10.92□□□□□ -0.66
NECAP1-218ENST00000639595 CHMP4BQ9H444 224 aaKnown RBP10.92□□□□□ -0.66
NECAP1-218ENST00000639595 TWISTNBQ3B726 338 aaPredicted RBP10.92□□□□□ -0.66
NECAP1-218ENST00000639595 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
NECAP1-218ENST00000639595 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 CHL1O00533 1208 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 ZBTB7BO15156 539 aaPredicted RBP10.91□□□□□ -0.66
NECAP1-218ENST00000639595 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 NGDNQ8NEJ9 315 aaKnown RBP10.91□□□□□ -0.66
NECAP1-218ENST00000639595 MAP3K19Q56UN5 1328 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 KCNA6P17658 529 aa10.91□□□□□ -0.66
NECAP1-218ENST00000639595 SBNO1A3KN83 1393 aa10.9□□□□□ -0.66
NECAP1-218ENST00000639595 ABCC4O15439 1325 aa10.9□□□□□ -0.66
NECAP1-218ENST00000639595 FLT4P35916 1363 aa10.9□□□□□ -0.66
NECAP1-218ENST00000639595 KDRP35968 1356 aa10.9□□□□□ -0.66
NECAP1-218ENST00000639595 SEC24BO95487 1268 aa10.9□□□□□ -0.66
NECAP1-218ENST00000639595 HAP1P54257 671 aaPredicted RBP10.9□□□□□ -0.66
NECAP1-218ENST00000639595 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.67
NECAP1-218ENST00000639595 RGPD1P0DJD0 1748 aa10.9□□□□□ -0.67
NECAP1-218ENST00000639595 PEAK1Q9H792 1746 aa10.9□□□□□ -0.67
NECAP1-218ENST00000639595 DCTN1Q14203 1278 aa10.89□□□□□ -0.67
NECAP1-218ENST00000639595 KIAA0232Q92628 1395 aa10.89□□□□□ -0.67
NECAP1-218ENST00000639595 USP35Q9P2H5 1018 aa10.89□□□□□ -0.67
NECAP1-218ENST00000639595 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-218ENST00000639595 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-218ENST00000639595 NBR1Q14596 966 aa10.88□□□□□ -0.67
NECAP1-218ENST00000639595 API5Q9BZZ5 524 aaKnown RBP10.88□□□□□ -0.67
NECAP1-218ENST00000639595 CEP170BQ9Y4F5 1589 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-218ENST00000639595 ELL2O00472 640 aaPredicted RBP10.88□□□□□ -0.67
NECAP1-218ENST00000639595 NUCB1Q02818 461 aa10.88□□□□□ -0.67
NECAP1-218ENST00000639595 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
NECAP1-218ENST00000639595 IGSF1Q8N6C5 1336 aa10.87□□□□□ -0.67
NECAP1-218ENST00000639595 CRB1P82279 1406 aa10.87□□□□□ -0.67
NECAP1-218ENST00000639595 DLG5Q8TDM6 1919 aa10.87□□□□□ -0.67
NECAP1-218ENST00000639595 RIMS1Q86UR5 1692 aaKnown RBP10.86□□□□□ -0.67
NECAP1-218ENST00000639595 NLRP6P59044 892 aa10.86□□□□□ -0.67
NECAP1-218ENST00000639595 MCM10Q7L590 875 aa10.86□□□□□ -0.67
NECAP1-218ENST00000639595 TBC1D32Q96NH3 1257 aa10.86□□□□□ -0.67
NECAP1-218ENST00000639595 EYA1Q99502 592 aa10.86□□□□□ -0.67
NECAP1-218ENST00000639595 VIRMAQ69YN4 1812 aaKnown RBP10.86□□□□□ -0.67
NECAP1-218ENST00000639595 HTATSF1O43719 755 aaKnown RBP10.85□□□□□ -0.67
NECAP1-218ENST00000639595 AMPHP49418 695 aa10.85□□□□□ -0.67
NECAP1-218ENST00000639595 GCC1Q96CN9 775 aa10.85□□□□□ -0.67
NECAP1-218ENST00000639595 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
NECAP1-218ENST00000639595 MTHFSDQ2M296 383 aaKnown RBP10.85□□□□□ -0.67
NECAP1-218ENST00000639595 INTS3Q68E01 1043 aaKnown RBP10.85□□□□□ -0.67
NECAP1-218ENST00000639595 SOX12O15370 315 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms