RNA–Protein interactions for RNA: ENST00000639394.1

PAX6-256, Transcript of paired box 6, human

TSL 5

Gene PAX6, Length 1,988 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-256	ENST00000639394	IPO7	O95373	1038 aa	Known RBP	13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	GOLGA6L1	Q8N7Z2	621 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	CALR3	Q96L12	384 aa	Known RBP	13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	TSPOAP1	O95153	1857 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	ZNF710	Q8N1W2	664 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	SUFU	Q9UMX1	484 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	ZKSCAN5	Q9Y2L8	839 aa		13.29	□□□□□ -0.28
PAX6-256	ENST00000639394	CCDC196	A0A1B0GTZ2	297 aa		13.28	□□□□□ -0.28
PAX6-256	ENST00000639394	TERF2	Q15554	542 aa		13.28	□□□□□ -0.28
PAX6-256	ENST00000639394	MSL3	Q8N5Y2	521 aa	Known RBP	13.28	□□□□□ -0.28
PAX6-256	ENST00000639394	COQ9	O75208	318 aa		13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	HSP90AB1	P08238	724 aa	Known RBP	13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	HSPA5	P11021	654 aa	Known RBP	13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	MLEC	Q14165	292 aa		13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	FAM177A1	Q8N128	213 aa	Predicted RBP	13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	CXorf56	Q9H5V9	222 aa		13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	ANAPC4	Q9UJX5	808 aa		13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	KIDINS220	Q9ULH0	1771 aa		13.27	□□□□□ -0.28
PAX6-256	ENST00000639394	MLH3	Q9UHC1	1453 aa		13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	ERBIN	Q96RT1	1412 aa		13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	GSC	P56915	257 aa	Predicted RBP	13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	ARMCX6	Q7L4S7	300 aa		13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	ANTXR1	Q9H6X2	564 aa		13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	RICTOR	Q6R327	1708 aa		13.27	□□□□□ -0.29
PAX6-256	ENST00000639394	IPO8	O15397	1037 aa	Known RBP	13.26	□□□□□ -0.29
PAX6-256	ENST00000639394	NUB1	Q9Y5A7	615 aa		13.26	□□□□□ -0.29
PAX6-256	ENST00000639394	SUDS3	Q9H7L9	328 aa	Predicted RBP	13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	HECW2	Q9P2P5	1572 aa		13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	FRMPD1	Q5SYB0	1578 aa		13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	RAPGEF3	O95398	923 aa		13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	CASQ1	P31415	396 aa		13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	TBC1D22A	Q8WUA7	517 aa		13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	NUCKS1	Q9H1E3	243 aa	Known RBP	13.25	□□□□□ -0.29
PAX6-256	ENST00000639394	PZP	P20742	1482 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	MYBPC2	Q14324	1141 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	SYCP1	Q15431	976 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	MPHOSPH9	Q99550	1183 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	DEF6	Q9H4E7	631 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	KDM5D	Q9BY66	1539 aa		13.24	□□□□□ -0.29
PAX6-256	ENST00000639394	NASP	P49321	788 aa	Predicted RBP	13.23	□□□□□ -0.29
PAX6-256	ENST00000639394	ANKRD7	Q92527	254 aa		13.23	□□□□□ -0.29
PAX6-256	ENST00000639394	CCDC39	Q9UFE4	941 aa		13.23	□□□□□ -0.29
PAX6-256	ENST00000639394	UNC13B	O14795	1591 aa		13.23	□□□□□ -0.29
PAX6-256	ENST00000639394		H0YHG0	523 aa		13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	TPM3	P06753	285 aa		13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	SARNP	P82979	210 aa	Known RBP	13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	ZRSR2	Q15696	482 aa	Known RBP	13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	UVSSA	Q2YD98	709 aa		13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	ZMYM4	Q5VZL5	1548 aa		13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	DHX29	Q7Z478	1369 aa	Known RBP	13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	CCDC144A	A2RUR9	1427 aa		13.22	□□□□□ -0.29
PAX6-256	ENST00000639394	ATP6V1A	P38606	617 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	BIRC2	Q13490	618 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	SDR16C5	Q8N3Y7	309 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	ERCC4	Q92889	916 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	MAGI2	Q86UL8	1455 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	ANKRD33B	A6NCL7	494 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	XPC	Q01831	940 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	MUM1L1	Q5H9M0	696 aa		13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	TACO1	Q9BSH4	297 aa	Known RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	GZF1	Q9H116	711 aa	Predicted RBP	13.21	□□□□□ -0.29
PAX6-256	ENST00000639394	NUP155	O75694	1391 aa		13.21	□□□□□ -0.3
PAX6-256	ENST00000639394	SPDYE4	A6NLX3	237 aa		13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	REC8	O95072	547 aa		13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	ARHGEF1	Q92888	912 aa	Known RBP	13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	NOL10	Q9BSC4	688 aa	Known RBP	13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	ABCA6	Q8N139	1617 aa		13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	RAD51AP2	Q09MP3	1159 aa		13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	CHAF1A	Q13111	956 aa	Predicted RBP	13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	JRKL	Q9Y4A0	524 aa		13.2	□□□□□ -0.3
PAX6-256	ENST00000639394	EIF2AK4	Q9P2K8	1649 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	KTN1	Q86UP2	1357 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	A2M	P01023	1474 aa		13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	COL17A1	Q9UMD9	1497 aa	Predicted RBP	13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	NOM1	Q5C9Z4	860 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	PNISR	Q8TF01	805 aa	Known RBP	13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	PDLIM2	Q96JY6	352 aa		13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	CHMP5	Q9NZZ3	219 aa		13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	DIP2C	Q9Y2E4	1556 aa		13.19	□□□□□ -0.3
PAX6-256	ENST00000639394	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	SMC3	Q9UQE7	1217 aa		13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	DEPDC5	O75140	1603 aa		13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	KDM4A	O75164	1064 aa		13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	ATP2B1	P20020	1258 aa		13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	DDX49	Q9Y6V7	483 aa	Known RBP	13.18	□□□□□ -0.3
PAX6-256	ENST00000639394	FAM135A	Q9P2D6	1515 aa		13.18	□□□□□ -0.3
PAX6-256	ENST00000639394		A0A1B0GUL7	405 aa		13.17	□□□□□ -0.3
PAX6-256	ENST00000639394	IQGAP3	Q86VI3	1631 aa		13.17	□□□□□ -0.3
PAX6-256	ENST00000639394	PANK3	Q9H999	370 aa		13.17	□□□□□ -0.3
PAX6-256	ENST00000639394	DIAPH3	Q9NSV4	1193 aa		13.17	□□□□□ -0.3
PAX6-256	ENST00000639394	YEATS2	Q9ULM3	1422 aa		13.17	□□□□□ -0.3
PAX6-256	ENST00000639394	POLD1	P28340	1107 aa		13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	KIAA2012	Q0VF49	1180 aa		13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	SUGP1	Q8IWZ8	645 aa	Known RBP	13.16	□□□□□ -0.3
PAX6-256	ENST00000639394	DDX41	Q9UJV9	622 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms