RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 TSPYL6Q8N831 410 aa13.46□□□□□ -0.25
NECAP1-216ENST00000639167 ROBO2Q9HCK4 1378 aa13.46□□□□□ -0.25
NECAP1-216ENST00000639167 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
NECAP1-216ENST00000639167 CDK12Q9NYV4 1490 aaPredicted RBP13.45□□□□□ -0.26
NECAP1-216ENST00000639167 ZBTB40Q9NUA8 1239 aa13.45□□□□□ -0.26
NECAP1-216ENST00000639167 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 TMEM2Q9UHN6 1383 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 TECPR2O15040 1411 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 VAMP4O75379 141 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 UPF2Q9HAU5 1272 aaKnown RBP13.44□□□□□ -0.26
NECAP1-216ENST00000639167 MBIPQ9NS73 344 aa13.44□□□□□ -0.26
NECAP1-216ENST00000639167 KNDC1Q76NI1 1749 aa13.43□□□□□ -0.26
NECAP1-216ENST00000639167 GNAI1P63096 354 aa13.43□□□□□ -0.26
NECAP1-216ENST00000639167 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
NECAP1-216ENST00000639167 MON2Q7Z3U7 1717 aa13.43□□□□□ -0.26
NECAP1-216ENST00000639167 CEBPAP49715 358 aaPredicted RBP13.42□□□□□ -0.26
NECAP1-216ENST00000639167 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
NECAP1-216ENST00000639167 IFT57Q9NWB7 429 aa13.42□□□□□ -0.26
NECAP1-216ENST00000639167 LTKP29376 864 aa13.42□□□□□ -0.26
NECAP1-216ENST00000639167 CALD1Q05682 793 aaKnown RBP13.42□□□□□ -0.26
NECAP1-216ENST00000639167 SMC5Q8IY18 1101 aa13.42□□□□□ -0.26
NECAP1-216ENST00000639167 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
NECAP1-216ENST00000639167 ADAMTS13Q76LX8 1427 aa13.42□□□□□ -0.26
NECAP1-216ENST00000639167 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 SOX12O15370 315 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 FRAT2O75474 233 aaPredicted RBP13.41□□□□□ -0.26
NECAP1-216ENST00000639167 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 AEBP1Q8IUX7 1158 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 SLC26A8Q96RN1 970 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 C1orf115Q9H7X2 142 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 ITSN1Q15811 1721 aa13.41□□□□□ -0.26
NECAP1-216ENST00000639167 C3P01024 1663 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 ACEP12821 1306 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 BECN1Q14457 450 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
NECAP1-216ENST00000639167 C8orf58Q8NAV2 365 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 SLKQ9H2G2 1235 aaPredicted RBP13.4□□□□□ -0.26
NECAP1-216ENST00000639167 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
NECAP1-216ENST00000639167 MFAP1P55081 439 aaKnown RBP13.39□□□□□ -0.27
NECAP1-216ENST00000639167 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-216ENST00000639167 LMOD3Q0VAK6 560 aa13.39□□□□□ -0.27
NECAP1-216ENST00000639167 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
NECAP1-216ENST00000639167 SULT6B1Q6IMI4 303 aa13.39□□□□□ -0.27
NECAP1-216ENST00000639167 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
NECAP1-216ENST00000639167 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
NECAP1-216ENST00000639167 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.39□□□□□ -0.27
NECAP1-216ENST00000639167 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
NECAP1-216ENST00000639167 ZBTB7BO15156 539 aaPredicted RBP13.38□□□□□ -0.27
NECAP1-216ENST00000639167 NUCB1Q02818 461 aa13.37□□□□□ -0.27
NECAP1-216ENST00000639167 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
NECAP1-216ENST00000639167 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
NECAP1-216ENST00000639167 TBC1D2Q9BYX2 928 aa13.37□□□□□ -0.27
NECAP1-216ENST00000639167 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
NECAP1-216ENST00000639167 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
NECAP1-216ENST00000639167 ARHGAP45Q92619 1136 aa13.36□□□□□ -0.27
NECAP1-216ENST00000639167 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 GSE1Q14687 1217 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 C22orf23Q9BZE7 217 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 ANKRD45Q5TZF3 282 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 MCM10Q7L590 875 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 SPRYD3Q8NCJ5 442 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 ABCC4O15439 1325 aa13.35□□□□□ -0.27
NECAP1-216ENST00000639167 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
NECAP1-216ENST00000639167 OVOS2A0A0J9YW53 1432 aa13.34□□□□□ -0.27
NECAP1-216ENST00000639167 USP6P35125 1406 aa13.34□□□□□ -0.27
NECAP1-216ENST00000639167 OVOS2Q6IE36 1432 aa13.34□□□□□ -0.27
NECAP1-216ENST00000639167 AMOTL2Q9Y2J4 779 aa13.34□□□□□ -0.27
NECAP1-216ENST00000639167 NRKQ7Z2Y5 1582 aa13.33□□□□□ -0.27
NECAP1-216ENST00000639167 EID1Q9Y6B2 187 aa13.33□□□□□ -0.28
NECAP1-216ENST00000639167 SIRT2Q8IXJ6 389 aa13.32□□□□□ -0.28
NECAP1-216ENST00000639167 API5Q9BZZ5 524 aaKnown RBP13.32□□□□□ -0.28
NECAP1-216ENST00000639167 PODXL2Q9NZ53 605 aa13.32□□□□□ -0.28
NECAP1-216ENST00000639167 TOPAZ1Q8N9V7 1692 aa13.32□□□□□ -0.28
NECAP1-216ENST00000639167 PEAK1Q9H792 1746 aa13.31□□□□□ -0.28
NECAP1-216ENST00000639167 CHMP4BQ9H444 224 aaKnown RBP13.31□□□□□ -0.28
NECAP1-216ENST00000639167 GCC1Q96CN9 775 aa13.31□□□□□ -0.28
NECAP1-216ENST00000639167 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
NECAP1-216ENST00000639167 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
NECAP1-216ENST00000639167 FOXO3O43524 673 aa13.3□□□□□ -0.28
NECAP1-216ENST00000639167 NGDNQ8NEJ9 315 aaKnown RBP13.3□□□□□ -0.28
NECAP1-216ENST00000639167 MIS18AQ9NYP9 233 aa13.3□□□□□ -0.28
NECAP1-216ENST00000639167 USP31Q70CQ4 1352 aa13.29□□□□□ -0.28
NECAP1-216ENST00000639167 CHL1O00533 1208 aa13.29□□□□□ -0.28
NECAP1-216ENST00000639167 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
NECAP1-216ENST00000639167 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.28
NECAP1-216ENST00000639167 BMP2KLQ5H9B9 411 aa13.27□□□□□ -0.28
NECAP1-216ENST00000639167 IL27Q8NEV9 243 aa13.27□□□□□ -0.28
NECAP1-216ENST00000639167 TBX22Q9Y458 520 aa13.27□□□□□ -0.28
NECAP1-216ENST00000639167 NALCNQ8IZF0 1738 aa13.27□□□□□ -0.28
NECAP1-216ENST00000639167 AMPHP49418 695 aa13.27□□□□□ -0.29
NECAP1-216ENST00000639167 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms