RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 CCDC34Q96HJ3 373 aa16.57■□□□□ 0.24
SCARB2-215ENST00000639145 CCT4P50991 539 aaKnown RBP16.57■□□□□ 0.24
SCARB2-215ENST00000639145 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
SCARB2-215ENST00000639145 MTMR7Q9Y216 660 aa16.57■□□□□ 0.24
SCARB2-215ENST00000639145 NFXL1Q6ZNB6 911 aa16.56■□□□□ 0.24
SCARB2-215ENST00000639145 PDZRN3Q9UPQ7 1066 aa16.56■□□□□ 0.24
SCARB2-215ENST00000639145 ZMYM3Q14202 1370 aa16.56■□□□□ 0.24
SCARB2-215ENST00000639145 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
SCARB2-215ENST00000639145 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
SCARB2-215ENST00000639145 AAMPQ13685 434 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 SRGAP3O43295 1099 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 KCNA6P17658 529 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 C20orf194Q5TEA3 1177 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 RALYLQ86SE5 291 aaKnown RBP16.55■□□□□ 0.24
SCARB2-215ENST00000639145 CABLES1Q8TDN4 633 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 MPHOSPH8Q99549 860 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 DUOX2Q9NRD8 1548 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 EXOC5O00471 708 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 STARD3NLO95772 234 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 MSH6P52701 1360 aa16.55■□□□□ 0.24
SCARB2-215ENST00000639145 TAF7Q15545 349 aaPredicted RBP16.54■□□□□ 0.24
SCARB2-215ENST00000639145 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
SCARB2-215ENST00000639145 AMOTQ4VCS5 1084 aa16.54■□□□□ 0.24
SCARB2-215ENST00000639145 SLFN5Q08AF3 891 aa16.54■□□□□ 0.24
SCARB2-215ENST00000639145 TBC1D2BQ9UPU7 963 aa16.53■□□□□ 0.24
SCARB2-215ENST00000639145 ERCC6L2Q5T890 1561 aa16.53■□□□□ 0.24
SCARB2-215ENST00000639145 FOSBP53539 338 aa16.53■□□□□ 0.24
SCARB2-215ENST00000639145 CTDP1Q9Y5B0 961 aaPredicted RBP16.53■□□□□ 0.24
SCARB2-215ENST00000639145 TOM1O60784 492 aa16.53■□□□□ 0.24
SCARB2-215ENST00000639145 IL1RAPL2Q9NP60 686 aa16.53■□□□□ 0.24
SCARB2-215ENST00000639145 CT47B1P0C2W7 299 aaPredicted RBP16.52■□□□□ 0.24
SCARB2-215ENST00000639145 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
SCARB2-215ENST00000639145 ANKRD24Q8TF21 1146 aa16.52■□□□□ 0.24
SCARB2-215ENST00000639145 CDC45O75419 566 aa16.52■□□□□ 0.23
SCARB2-215ENST00000639145 ERICH2A1L162 156 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 FAM83GA6ND36 823 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
SCARB2-215ENST00000639145 SSH1Q8WYL5 1049 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 C22orf23Q9BZE7 217 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 TESK2Q96S53 571 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 TTC21BQ7Z4L5 1316 aa16.51■□□□□ 0.23
SCARB2-215ENST00000639145 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
SCARB2-215ENST00000639145 L1TD1Q5T7N2 865 aaKnown RBP16.51■□□□□ 0.23
SCARB2-215ENST00000639145 VPS37CA5D8V6 355 aaPredicted RBP16.51■□□□□ 0.23
SCARB2-215ENST00000639145 TRIM29Q14134 588 aa16.5■□□□□ 0.23
SCARB2-215ENST00000639145 TMEM57Q8N5G2 664 aa16.5■□□□□ 0.23
SCARB2-215ENST00000639145 F6X3S4 739 aa16.5■□□□□ 0.23
SCARB2-215ENST00000639145 NPHP3Q7Z494 1330 aa16.5■□□□□ 0.23
SCARB2-215ENST00000639145 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.5■□□□□ 0.23
SCARB2-215ENST00000639145 CHMP4CQ96CF2 233 aa16.5■□□□□ 0.23
SCARB2-215ENST00000639145 PZPP20742 1482 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 PTMSP20962 102 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 CCDC158Q5M9N0 1113 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 ERC1Q8IUD2 1116 aa16.49■□□□□ 0.23
SCARB2-215ENST00000639145 KDM4AO75164 1064 aa16.48■□□□□ 0.23
SCARB2-215ENST00000639145 MAP4K4O95819 1239 aaPredicted RBP16.48■□□□□ 0.23
SCARB2-215ENST00000639145 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
SCARB2-215ENST00000639145 EXOC6BQ9Y2D4 811 aa16.48■□□□□ 0.23
SCARB2-215ENST00000639145 DDX49Q9Y6V7 483 aaKnown RBP16.48■□□□□ 0.23
SCARB2-215ENST00000639145 GCC1Q96CN9 775 aa16.48■□□□□ 0.23
SCARB2-215ENST00000639145 TCOF1Q13428 1488 aaKnown RBP16.48■□□□□ 0.23
SCARB2-215ENST00000639145 TTC39AQ5SRH9 613 aa16.47■□□□□ 0.23
SCARB2-215ENST00000639145 ATP6V1DQ9Y5K8 247 aa16.47■□□□□ 0.23
SCARB2-215ENST00000639145 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
SCARB2-215ENST00000639145 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SCARB2-215ENST00000639145 RRP12Q5JTH9 1297 aaKnown RBP16.47■□□□□ 0.23
SCARB2-215ENST00000639145 STK11IPQ8N1F8 1099 aa16.47■□□□□ 0.23
SCARB2-215ENST00000639145 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
SCARB2-215ENST00000639145 DEKP35659 375 aaKnown RBP16.47■□□□□ 0.23
SCARB2-215ENST00000639145 CFAP43Q8NDM7 1665 aa16.47■□□□□ 0.23
SCARB2-215ENST00000639145 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-215ENST00000639145 IFT57Q9NWB7 429 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 NAP1L5Q96NT1 182 aaPredicted RBP16.46■□□□□ 0.23
SCARB2-215ENST00000639145 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 ANXA1P04083 346 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 AACSQ86V21 672 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 SMC3Q9UQE7 1217 aa16.46■□□□□ 0.23
SCARB2-215ENST00000639145 GNL3LQ9NVN8 582 aaKnown RBP16.45■□□□□ 0.22
SCARB2-215ENST00000639145 ZBTB3Q9H5J0 574 aa16.45■□□□□ 0.22
SCARB2-215ENST00000639145 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
SCARB2-215ENST00000639145 MYD88Q99836 296 aa16.45■□□□□ 0.22
SCARB2-215ENST00000639145 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
SCARB2-215ENST00000639145 FANCIQ9NVI1 1328 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 ITSN2Q9NZM3 1697 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 ZPR1O75312 459 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 GPTP24298 496 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 PES1O00541 588 aaKnown RBP16.44■□□□□ 0.22
SCARB2-215ENST00000639145 RARSP54136 660 aaKnown RBP16.44■□□□□ 0.22
SCARB2-215ENST00000639145 LARP1Q6PKG0 1096 aaKnown RBP16.44■□□□□ 0.22
SCARB2-215ENST00000639145 KDM6BO15054 1643 aa16.44■□□□□ 0.22
SCARB2-215ENST00000639145 NEK4P51957 841 aa16.43■□□□□ 0.22
SCARB2-215ENST00000639145 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
SCARB2-215ENST00000639145 FMNL2Q96PY5 1086 aa16.43■□□□□ 0.22
SCARB2-215ENST00000639145 TPM4P67936 248 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms