RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-215	ENST00000639071	C8orf58	Q8NAV2	365 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	STAG3	Q9UJ98	1225 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	PIK3C2B	O00750	1634 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	MLH3	Q9UHC1	1453 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071		K7ELQ4	463 aa	Predicted RBP	11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	NFE2L2	Q16236	605 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	GCC1	Q96CN9	775 aa		11.69	□□□□□ -0.54
NECAP1-215	ENST00000639071	CFAP74	Q9C0B2	1584 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	AK9	Q5TCS8	1911 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	CLCN1	P35523	988 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	TWISTNB	Q3B726	338 aa	Predicted RBP	11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	UBE2Q2	Q8WVN8	375 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	PNPLA6	Q8IY17	1366 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	RRS1	Q15050	365 aa	Known RBP	11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	NME9	Q86XW9	330 aa		11.68	□□□□□ -0.54
NECAP1-215	ENST00000639071	GSPT1	P15170	499 aa	Known RBP	11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	KRT24	Q2M2I5	525 aa		11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	TRIM44	Q96DX7	344 aa	Predicted RBP	11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	FAM135B	Q49AJ0	1406 aa		11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	NCKAP5L	Q9HCH0	1330 aa		11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	ESPN	B1AK53	854 aa		11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.67	□□□□□ -0.54
NECAP1-215	ENST00000639071	NCL	P19338	710 aa	Known RBP	11.66	□□□□□ -0.54
NECAP1-215	ENST00000639071	MED14	O60244	1454 aa		11.66	□□□□□ -0.54
NECAP1-215	ENST00000639071	CDC45	O75419	566 aa		11.66	□□□□□ -0.54
NECAP1-215	ENST00000639071	GNAI1	P63096	354 aa		11.66	□□□□□ -0.54
NECAP1-215	ENST00000639071	ANKRD26	Q9UPS8	1709 aa		11.65	□□□□□ -0.54
NECAP1-215	ENST00000639071	SMARCA5	O60264	1052 aa	Predicted RBP	11.65	□□□□□ -0.54
NECAP1-215	ENST00000639071	SLC52A1	Q9NWF4	448 aa		11.65	□□□□□ -0.54
NECAP1-215	ENST00000639071	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.65	□□□□□ -0.54
NECAP1-215	ENST00000639071	PKP1	Q13835	747 aa		11.65	□□□□□ -0.55
NECAP1-215	ENST00000639071	DDX49	Q9Y6V7	483 aa	Known RBP	11.65	□□□□□ -0.55
NECAP1-215	ENST00000639071	ABCC4	O15439	1325 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	PLEKHM2	Q8IWE5	1019 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	IFT57	Q9NWB7	429 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	YEATS2	Q9ULM3	1422 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	IL13	P35225	146 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	MCTP1	Q6DN14	999 aa		11.64	□□□□□ -0.55
NECAP1-215	ENST00000639071	ZFYVE9	O95405	1425 aa		11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	PTCH1	Q13635	1447 aa		11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	MAP2	P11137	1827 aa	Known RBP	11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	KIF20B	Q96Q89	1820 aa		11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	ARHGAP45	Q92619	1136 aa		11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	CHAMP1	Q96JM3	812 aa		11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	BAG4	O95429	457 aa	Known RBP	11.63	□□□□□ -0.55
NECAP1-215	ENST00000639071	BRPF1	P55201	1214 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	CALD1	Q05682	793 aa	Known RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	ZNF428	Q96B54	188 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	GOLGA6L22	H0YM25	854 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	ZNF853	P0CG23	659 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	AEBP1	Q8IUX7	1158 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	ARHGEF40	Q8TER5	1519 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	CFAP44	Q96MT7	982 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	CHMP4B	Q9H444	224 aa	Known RBP	11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	DIP2C	Q9Y2E4	1556 aa		11.62	□□□□□ -0.55
NECAP1-215	ENST00000639071	SOX12	O15370	315 aa		11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	NASP	P49321	788 aa	Predicted RBP	11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	TTC22	Q5TAA0	569 aa		11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	API5	Q9BZZ5	524 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	PIK3R4	Q99570	1358 aa		11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	CAVIN1	Q6NZI2	390 aa	Known RBP	11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	MCM10	Q7L590	875 aa		11.61	□□□□□ -0.55
NECAP1-215	ENST00000639071	TMEM131L	A2VDJ0	1609 aa		11.6	□□□□□ -0.55
NECAP1-215	ENST00000639071	ALK	Q9UM73	1620 aa		11.6	□□□□□ -0.55
NECAP1-215	ENST00000639071	ZGPAT	Q8N5A5	531 aa	Known RBP	11.6	□□□□□ -0.55
NECAP1-215	ENST00000639071	KNDC1	Q76NI1	1749 aa		11.6	□□□□□ -0.55
NECAP1-215	ENST00000639071	MIS18A	Q9NYP9	233 aa		11.6	□□□□□ -0.55
NECAP1-215	ENST00000639071	RIMS2	Q9UQ26	1411 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	NUTM2F	A1L443	756 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	MLEC	Q14165	292 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	TXNDC2	Q86VQ3	553 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	DCTPP1	Q9H773	170 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	ISY1	Q9ULR0	285 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	CLTC	Q00610	1675 aa	Known RBP	11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	SDS	P20132	328 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	TSHZ3	Q63HK5	1081 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	COG3	Q96JB2	828 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	USP26	Q9BXU7	913 aa		11.59	□□□□□ -0.55
NECAP1-215	ENST00000639071	RABEP1	Q15276	862 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	SULT6B1	Q6IMI4	303 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	MEIS3	Q99687	375 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	RBM27	Q9P2N5	1060 aa	Known RBP	11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	ARHGAP31	Q2M1Z3	1444 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	CDC42BPG	Q6DT37	1551 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	PREX1	Q8TCU6	1659 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	DLG5	Q8TDM6	1919 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	KLHL40	Q2TBA0	621 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	SLC4A10	Q6U841	1118 aa		11.58	□□□□□ -0.56
NECAP1-215	ENST00000639071	PRPF40A	O75400	957 aa	Known RBP	11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	INTS3	Q68E01	1043 aa	Known RBP	11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	CEP85	Q6P2H3	762 aa		11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	NOL8	Q76FK4	1167 aa	Known RBP	11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	MSH6	P52701	1360 aa		11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	LMOD3	Q0VAK6	560 aa		11.57	□□□□□ -0.56
NECAP1-215	ENST00000639071	ANKRD44	Q8N8A2	993 aa		11.56	□□□□□ -0.56

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