RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 ABCC3O15438 1527 aa10.13□□□□□ -0.79
SCARB2-211ENST00000638603 CIZ1Q9ULV3 898 aaPredicted RBP10.13□□□□□ -0.79
SCARB2-211ENST00000638603 SSFA2P28290 1259 aa10.12□□□□□ -0.79
SCARB2-211ENST00000638603 MYO3AQ8NEV4 1616 aa10.12□□□□□ -0.79
SCARB2-211ENST00000638603 CD2BP2O95400 341 aaKnown RBP10.12□□□□□ -0.79
SCARB2-211ENST00000638603 NCKAP5LQ9HCH0 1330 aa10.12□□□□□ -0.79
SCARB2-211ENST00000638603 MLH3Q9UHC1 1453 aa10.12□□□□□ -0.79
SCARB2-211ENST00000638603 SULT6B1Q6IMI4 303 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 C16orf71Q8IYS4 520 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-211ENST00000638603 ARHGAP45Q92619 1136 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 CFAP44Q96MT7 982 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 FSD2A1L4K1 749 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 FOXD4L5Q5VV16 416 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-211ENST00000638603 FOXD4L4Q8WXT5 416 aaPredicted RBP10.11□□□□□ -0.79
SCARB2-211ENST00000638603 PTMSP20962 102 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 PPIP5K1Q6PFW1 1433 aa10.11□□□□□ -0.79
SCARB2-211ENST00000638603 SMARCA5O60264 1052 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-211ENST00000638603 MCTP1Q6DN14 999 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 GAS2L2Q8NHY3 880 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 HAP1P54257 671 aaPredicted RBP10.1□□□□□ -0.79
SCARB2-211ENST00000638603 RAB3GAP1Q15042 981 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 MCM10Q7L590 875 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 NUDT16Q96DE0 195 aaKnown RBP10.1□□□□□ -0.79
SCARB2-211ENST00000638603 INTS3Q68E01 1043 aaKnown RBP10.1□□□□□ -0.79
SCARB2-211ENST00000638603 CYB5RLQ6IPT4 315 aa10.1□□□□□ -0.79
SCARB2-211ENST00000638603 IL13P35225 146 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-211ENST00000638603 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 PPLO60437 1756 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 ST18O60284 1047 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 RABEP1Q15276 862 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 NOL8Q76FK4 1167 aaKnown RBP10.09□□□□□ -0.79
SCARB2-211ENST00000638603 AEBP1Q8IUX7 1158 aa10.09□□□□□ -0.79
SCARB2-211ENST00000638603 ZNF692Q9BU19 519 aaPredicted RBP10.09□□□□□ -0.79
SCARB2-211ENST00000638603 ESPNB1AK53 854 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 RTF1Q92541 710 aaKnown RBP10.08□□□□□ -0.8
SCARB2-211ENST00000638603 IFT172Q9UG01 1749 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 PLEKHM2Q8IWE5 1019 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 OTUD7AQ8TE49 926 aaPredicted RBP10.08□□□□□ -0.8
SCARB2-211ENST00000638603 CCDC61Q9Y6R9 512 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 YEATS2Q9ULM3 1422 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 HECW2Q9P2P5 1572 aa10.08□□□□□ -0.8
SCARB2-211ENST00000638603 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
SCARB2-211ENST00000638603 HMMRO75330 724 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 NASPP49321 788 aaPredicted RBP10.07□□□□□ -0.8
SCARB2-211ENST00000638603 CAVIN1Q6NZI2 390 aaKnown RBP10.07□□□□□ -0.8
SCARB2-211ENST00000638603 GAS2L3Q86XJ1 694 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
SCARB2-211ENST00000638603 PNPLA6Q8IY17 1366 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 NEXMIFQ5QGS0 1516 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 GSPT1P15170 499 aaKnown RBP10.07□□□□□ -0.8
SCARB2-211ENST00000638603 FAM69CQ0P6D2 419 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 NECTIN2Q92692 538 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 TTC22Q5TAA0 569 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 KIF2CQ99661 725 aa10.07□□□□□ -0.8
SCARB2-211ENST00000638603 CLCN1P35523 988 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 NUCB2P80303 420 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 DCTPP1Q9H773 170 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 ABCC4O15439 1325 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 FRMPD1Q5SYB0 1578 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 BAG4O95429 457 aaKnown RBP10.06□□□□□ -0.8
SCARB2-211ENST00000638603 ADGRB2O60241 1585 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 TRIM6-TRIM34B2RNG4 842 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 REC8O95072 547 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
SCARB2-211ENST00000638603 MEIS3Q99687 375 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 FAM135BQ49AJ0 1406 aa10.06□□□□□ -0.8
SCARB2-211ENST00000638603 COL3A1P02461 1466 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 MSNP26038 577 aaKnown RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 RPAP2Q8IXW5 612 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 USP32Q8NFA0 1604 aa10.05□□□□□ -0.8
SCARB2-211ENST00000638603 F6X3S4 739 aa10.05□□□□□ -0.8
SCARB2-211ENST00000638603 SDSP20132 328 aa10.05□□□□□ -0.8
SCARB2-211ENST00000638603 FOXD4L6Q3SYB3 417 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 FOXD4L3Q6VB84 417 aaPredicted RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
SCARB2-211ENST00000638603 ZC3H13Q5T200 1668 aaKnown RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 PRPF40AO75400 957 aaKnown RBP10.05□□□□□ -0.8
SCARB2-211ENST00000638603 RILPL2Q969X0 211 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 STK31Q9BXU1 1019 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 PTPRMP28827 1452 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 LRRC7Q96NW7 1537 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 ARHGEF28Q8N1W1 1705 aaKnown RBP10.04□□□□□ -0.8
SCARB2-211ENST00000638603 ZNF853P0CG23 659 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 HDGFP51858 240 aaKnown RBP10.04□□□□□ -0.8
SCARB2-211ENST00000638603 ANKRD44Q8N8A2 993 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 TSHZ3Q63HK5 1081 aa10.04□□□□□ -0.8
SCARB2-211ENST00000638603 CD163L1Q9NR16 1453 aa10.03□□□□□ -0.8
SCARB2-211ENST00000638603 NEK4P51957 841 aa10.03□□□□□ -0.8
SCARB2-211ENST00000638603 EIF4A2Q14240 407 aaKnown RBP10.03□□□□□ -0.8
SCARB2-211ENST00000638603 HSP90AB2PQ58FF8 381 aa10.03□□□□□ -0.8
SCARB2-211ENST00000638603 CEP85Q6P2H3 762 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms