RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 F6X3S4 739 aa17.28■□□□□ 0.36
SCARB2-208ENST00000638372 PSMA5P28066 241 aa17.28■□□□□ 0.36
SCARB2-208ENST00000638372 NKTRP30414 1462 aaKnown RBP17.28■□□□□ 0.36
SCARB2-208ENST00000638372 DHX16O60231 1041 aaKnown RBP17.28■□□□□ 0.36
SCARB2-208ENST00000638372 TRIM27P14373 513 aa17.28■□□□□ 0.36
SCARB2-208ENST00000638372 ERC1Q8IUD2 1116 aa17.27■□□□□ 0.36
SCARB2-208ENST00000638372 ERICH2A1L162 156 aa17.27■□□□□ 0.36
SCARB2-208ENST00000638372 POGZQ7Z3K3 1410 aa17.27■□□□□ 0.35
SCARB2-208ENST00000638372 FIBPO43427 364 aa17.27■□□□□ 0.35
SCARB2-208ENST00000638372 SPG7Q9UQ90 795 aa17.27■□□□□ 0.35
SCARB2-208ENST00000638372 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 AMOTL1Q8IY63 956 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 SMARCA5O60264 1052 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-208ENST00000638372 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 NASPP49321 788 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-208ENST00000638372 MRE11P49959 708 aa17.26■□□□□ 0.35
SCARB2-208ENST00000638372 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SCARB2-208ENST00000638372 MCM2P49736 904 aa17.25■□□□□ 0.35
SCARB2-208ENST00000638372 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-208ENST00000638372 K7ELQ4 463 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-208ENST00000638372 MEX3CQ5U5Q3 659 aaKnown RBP17.25■□□□□ 0.35
SCARB2-208ENST00000638372 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
SCARB2-208ENST00000638372 AACSQ86V21 672 aa17.25■□□□□ 0.35
SCARB2-208ENST00000638372 ZNF592Q92610 1267 aa17.25■□□□□ 0.35
SCARB2-208ENST00000638372 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
SCARB2-208ENST00000638372 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
SCARB2-208ENST00000638372 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
SCARB2-208ENST00000638372 CWC27Q6UX04 472 aaKnown RBP17.24■□□□□ 0.35
SCARB2-208ENST00000638372 NUTM1Q86Y26 1132 aa17.24■□□□□ 0.35
SCARB2-208ENST00000638372 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
SCARB2-208ENST00000638372 MTMR7Q9Y216 660 aa17.24■□□□□ 0.35
SCARB2-208ENST00000638372 KDM5BQ9UGL1 1544 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 TPM3P06753 285 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 PLCH2O75038 1416 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 ALDH1L2Q3SY69 923 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 SDF4Q9BRK5 362 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 PTCD1O75127 700 aaKnown RBP17.23■□□□□ 0.35
SCARB2-208ENST00000638372 TESK2Q96S53 571 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 ATP2B1P20020 1258 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 STK3Q13188 491 aa17.23■□□□□ 0.35
SCARB2-208ENST00000638372 SAFBQ15424 915 aaKnown RBP eCLIP17.23■□□□□ 0.35
SCARB2-208ENST00000638372 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
SCARB2-208ENST00000638372 KCNH5Q8NCM2 988 aa17.22■□□□□ 0.35
SCARB2-208ENST00000638372 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
SCARB2-208ENST00000638372 HIP1O00291 1037 aa17.22■□□□□ 0.35
SCARB2-208ENST00000638372 CCAR2Q8N163 923 aaKnown RBP17.22■□□□□ 0.35
SCARB2-208ENST00000638372 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
SCARB2-208ENST00000638372 CEBPZQ03701 1054 aaKnown RBP17.21■□□□□ 0.35
SCARB2-208ENST00000638372 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
SCARB2-208ENST00000638372 CYP46A1Q9Y6A2 500 aa17.21■□□□□ 0.35
SCARB2-208ENST00000638372 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.35
SCARB2-208ENST00000638372 NUTM2BA6NNL0 878 aaPredicted RBP17.21■□□□□ 0.34
SCARB2-208ENST00000638372 NUTM2EB1AL46 878 aaPredicted RBP17.21■□□□□ 0.34
SCARB2-208ENST00000638372 NUTM2AQ8IVF1 878 aaPredicted RBP17.21■□□□□ 0.34
SCARB2-208ENST00000638372 SYCP2Q9BX26 1530 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 IGHDP01880 384 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 PDE4CQ08493 712 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 RRP12Q5JTH9 1297 aaKnown RBP17.2■□□□□ 0.34
SCARB2-208ENST00000638372 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
SCARB2-208ENST00000638372 MBD3O95983 291 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 PDCP20941 246 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 FAM43AQ8N2R8 423 aa17.2■□□□□ 0.34
SCARB2-208ENST00000638372 RSPH6AQ9H0K4 717 aa17.19■□□□□ 0.34
SCARB2-208ENST00000638372 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
SCARB2-208ENST00000638372 FKBP4Q02790 459 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCARB2-208ENST00000638372 HSP90AA2PQ14568 343 aaPredicted RBP17.19■□□□□ 0.34
SCARB2-208ENST00000638372 TSR1Q2NL82 804 aaKnown RBP17.18■□□□□ 0.34
SCARB2-208ENST00000638372 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 ACEP12821 1306 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 RALGAPBQ86X10 1494 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 MCM4P33991 863 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 STK11IPQ8N1F8 1099 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 TRIM34Q9BYJ4 488 aa17.18■□□□□ 0.34
SCARB2-208ENST00000638372 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
SCARB2-208ENST00000638372 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
SCARB2-208ENST00000638372 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-208ENST00000638372 CEP126Q9P2H0 1117 aa17.17■□□□□ 0.34
SCARB2-208ENST00000638372 MX1P20591 662 aa17.16■□□□□ 0.34
SCARB2-208ENST00000638372 ASXL2Q76L83 1435 aa17.16■□□□□ 0.34
SCARB2-208ENST00000638372 TPM1P09493 284 aa17.16■□□□□ 0.34
SCARB2-208ENST00000638372 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
SCARB2-208ENST00000638372 CWC22Q9HCG8 908 aaKnown RBP17.16■□□□□ 0.34
SCARB2-208ENST00000638372 FMNL2Q96PY5 1086 aa17.16■□□□□ 0.34
SCARB2-208ENST00000638372 BLOC1S2Q6QNY1 142 aa17.15■□□□□ 0.34
SCARB2-208ENST00000638372 MPNDQ8N594 471 aa17.15■□□□□ 0.34
SCARB2-208ENST00000638372 LRRFIP2Q9Y608 721 aaKnown RBP17.15■□□□□ 0.34
SCARB2-208ENST00000638372 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
SCARB2-208ENST00000638372 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
SCARB2-208ENST00000638372 FLIIQ13045 1269 aa17.14■□□□□ 0.34
SCARB2-208ENST00000638372 HOMER1Q86YM7 354 aa17.14■□□□□ 0.34
SCARB2-208ENST00000638372 FAM13BQ9NYF5 915 aa17.14■□□□□ 0.34
SCARB2-208ENST00000638372 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms